Detail information of GWHGAAEX015176/evm.TU.scaffold_64.175


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|20088907|ref|NP_614982.1|1.00E-32TraB family protein [Methanosarcina acetivorans C2A]
KOGKOG28601.00E-40Uncharacterized conserved protein, contains TraB domain
nrgi|694996195|ref|XP_009392712.1|3.24E-161PREDICTED: traB domain-containing protein-like [Musa acuminata subsp. malaccensis]
trEMBLtr|W5A3E4|W5A3E4_WHEAT3.00E-150Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_1BL_7DB957BCB.2}
TAIRAT2G32340_21.00E-40Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006736790513725848+
Transcript Sequence

Network for GWHGAAEX015176

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01963.16TraB1503726.40E-27
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms23.520
SRR2545915Juvenile tuber22.460
SRP108465SRR5643513five period of Gastrodia elata31.160
SRR5643514five period of Gastrodia elata29.440
SRR5643515five period of Gastrodia elata28.890
SRR5643524five period of Gastrodia elata27.440
SRR5643525five period of Gastrodia elata25.770
SRR5643528five period of Gastrodia elata25.520
SRR5643658five period of Gastrodia elata28.050
SRR5643659five period of Gastrodia elata27.560
SRR5643660five period of Gastrodia elata28.140
SRR5643661five period of Gastrodia elata27.510
SRR5643662five period of Gastrodia elata27.160
SRR5643663five period of Gastrodia elata27.170
SRR5643664five period of Gastrodia elata27.290
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.830
SRR6049655Rhizomagastrodiae_C368-T10_good_114.810
SRR6049656Rhizomagastrodiae_C368-T07_good_126.850
SRR6049657Rhizomagastrodiae_C368-T07_good_123.970
SRR6049658Rhizomagastrodiae_C368-T04_good_121.100
SRR6049659Rhizomagastrodiae_C368-T04_good_124.550
SRR6049660Rhizomagastrodiae_C368-T01_good_121.940
SRR6049661Rhizomagastrodiae_C368-T04_good_120.700
SRR6049662Rhizomagastrodiae_C368-T01_good_123.780
SRR6049663Rhizomagastrodiae_C368-T01_good_124.450
SRR6049664Rhizomagastrodiae_C368-T10_good_130.360
SRR6049665Rhizomagastrodiae_C368-T10_good_130.360
SRP279888GastroGastrodia elata tuber 36.62
JuvenJuvenile tuber43.24
Mother_GastroMother tuber of Gastrodia elata 54.76
Mother_JuvenMother tuber of Juvenile 51.06