Detail information of GWHGAAEX015181/evm.TU.scaffold_64.181
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|343085920|ref|YP_004775215.1| | 1.00E-60 | RHS repeat-associated core domain-containing protein [Cyclobacterium marinum DSM 745] |
| nr | gi|672162921|ref|XP_008801288.1| | 2.20E-173 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Phoenix dactylifera] |
| Swissprot | tr|Q9LP24|Y1571_ARATH | 7.00E-111 | Probable leucine-rich repeat receptor-like protein kinase At1g35710 (Precursor) |
| trEMBL | tr|B9F357|B9F357_ORYSJ | 6.00E-166 | Putative uncharacterized protein {ECO:0000313|EMBL:EEE56354.1} |
| TAIR | AT1G35710 | 3.00E-110 | Protein kinase family protein with leucine-rich repeat domain |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000067 | 3829209 | 3831754 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015181
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF08263.11 | LRRNT_2 | 22 | 65 | 2.70E-09 |
| PF13855.5 | LRR_8 | 93 | 152 | 4.70E-08 |
| PF00560.32 | LRR_1 | 214 | 236 | 0.69 |
| PF00560.32 | LRR_1 | 334 | 356 | 0.61 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 3.540 |
| SRR2545915 | Juvenile tuber | 5.270 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 2.020 |
| SRR5643514 | five period of Gastrodia elata | 3.060 | |
| SRR5643515 | five period of Gastrodia elata | 4.240 | |
| SRR5643524 | five period of Gastrodia elata | 2.430 | |
| SRR5643525 | five period of Gastrodia elata | 7.670 | |
| SRR5643528 | five period of Gastrodia elata | 6.740 | |
| SRR5643658 | five period of Gastrodia elata | 8.760 | |
| SRR5643659 | five period of Gastrodia elata | 3.280 | |
| SRR5643660 | five period of Gastrodia elata | 2.680 | |
| SRR5643661 | five period of Gastrodia elata | 3.090 | |
| SRR5643662 | five period of Gastrodia elata | 4.710 | |
| SRR5643663 | five period of Gastrodia elata | 3.640 | |
| SRR5643664 | five period of Gastrodia elata | 3.840 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 4.950 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 4.150 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 4.280 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.110 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 3.680 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 3.660 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 5.770 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 4.650 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 5.490 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 6.910 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 4.660 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 4.660 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.33 |
| Juven | Juvenile tuber | 3.13 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 8.52 | |
| Mother_Juven | Mother tuber of Juvenile | 7.02 |