Detail information of GWHGAAEX015184/evm.TU.scaffold_64.184


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG21970Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins
nrgi|743759195|ref|XP_010930815.1|0PREDICTED: TBC1 domain family member 15 isoform X1 [Elaeis guineensis]
trEMBLtr|M0SRL2|M0SRL2_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P24010_001}
TAIRAT5G547800Ypt/Rab-GAP domain of gyp1p superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006738447303870515-
Transcript Sequence

Network for GWHGAAEX015184

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00566.17RabGAP-TBC1593232.40E-38
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms121.800
SRR2545915Juvenile tuber134.220
SRP108465SRR5643513five period of Gastrodia elata84.720
SRR5643514five period of Gastrodia elata96.020
SRR5643515five period of Gastrodia elata83.840
SRR5643524five period of Gastrodia elata83.000
SRR5643525five period of Gastrodia elata152.730
SRR5643528five period of Gastrodia elata156.790
SRR5643658five period of Gastrodia elata185.260
SRR5643659five period of Gastrodia elata56.510
SRR5643660five period of Gastrodia elata61.810
SRR5643661five period of Gastrodia elata64.010
SRR5643662five period of Gastrodia elata74.610
SRR5643663five period of Gastrodia elata79.780
SRR5643664five period of Gastrodia elata83.810
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1103.880
SRR6049655Rhizomagastrodiae_C368-T10_good_188.890
SRR6049656Rhizomagastrodiae_C368-T07_good_194.050
SRR6049657Rhizomagastrodiae_C368-T07_good_1101.520
SRR6049658Rhizomagastrodiae_C368-T04_good_191.740
SRR6049659Rhizomagastrodiae_C368-T04_good_1115.320
SRR6049660Rhizomagastrodiae_C368-T01_good_185.530
SRR6049661Rhizomagastrodiae_C368-T04_good_181.910
SRR6049662Rhizomagastrodiae_C368-T01_good_176.370
SRR6049663Rhizomagastrodiae_C368-T01_good_177.310
SRR6049664Rhizomagastrodiae_C368-T10_good_1108.270
SRR6049665Rhizomagastrodiae_C368-T10_good_1108.270
SRP279888GastroGastrodia elata tuber 52.64
JuvenJuvenile tuber69.46
Mother_GastroMother tuber of Gastrodia elata 66.07
Mother_JuvenMother tuber of Juvenile 55.73