Detail information of GWHGAAEX015192/evm.TU.scaffold_64.194


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|743793439|ref|XP_010923930.1|3.18E-72PREDICTED: protein LHCP TRANSLOCATION DEFECT [Elaeis guineensis]
Swissprottr|Q8VY88|LTD_ARATH8.00E-59Protein LHCP TRANSLOCATION DEFECT (Precursor)
trEMBLtr|A0A067L4S4|A0A067L4S4_JATCU9.00E-69Uncharacterized protein {ECO:0000313|EMBL:KDP39089.1}
TAIRAT1G509007.00E-57Ankyrin repeat family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006740116164020020-
Transcript Sequence

Network for GWHGAAEX015192

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
----------
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms17.050
SRR2545915Juvenile tuber17.460
SRP108465SRR5643513five period of Gastrodia elata17.370
SRR5643514five period of Gastrodia elata12.830
SRR5643515five period of Gastrodia elata18.830
SRR5643524five period of Gastrodia elata14.830
SRR5643525five period of Gastrodia elata29.540
SRR5643528five period of Gastrodia elata25.620
SRR5643658five period of Gastrodia elata39.360
SRR5643659five period of Gastrodia elata13.460
SRR5643660five period of Gastrodia elata16.250
SRR5643661five period of Gastrodia elata16.410
SRR5643662five period of Gastrodia elata24.560
SRR5643663five period of Gastrodia elata21.170
SRR5643664five period of Gastrodia elata18.410
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_122.180
SRR6049655Rhizomagastrodiae_C368-T10_good_132.640
SRR6049656Rhizomagastrodiae_C368-T07_good_118.970
SRR6049657Rhizomagastrodiae_C368-T07_good_126.140
SRR6049658Rhizomagastrodiae_C368-T04_good_126.710
SRR6049659Rhizomagastrodiae_C368-T04_good_129.150
SRR6049660Rhizomagastrodiae_C368-T01_good_120.550
SRR6049661Rhizomagastrodiae_C368-T04_good_117.880
SRR6049662Rhizomagastrodiae_C368-T01_good_118.990
SRR6049663Rhizomagastrodiae_C368-T01_good_122.720
SRR6049664Rhizomagastrodiae_C368-T10_good_125.410
SRR6049665Rhizomagastrodiae_C368-T10_good_125.410
SRP279888GastroGastrodia elata tuber 30.77
JuvenJuvenile tuber18.10
Mother_GastroMother tuber of Gastrodia elata 36.09
Mother_JuvenMother tuber of Juvenile 18.35