Detail information of GWHGAAEX015195/evm.TU.scaffold_64.197
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|189502744|ref|YP_001958461.1| | 6.00E-29 | hypothetical protein Aasi_1443 [Candidatus Amoebophilus asiaticus 5a2] |
| KOG | KOG1187 | 2.00E-155 | Serine/threonine protein kinase |
| nr | gi|743793447|ref|XP_010923933.1| | 1.49E-170 | PREDICTED: serine/threonine-protein kinase CDL1-like [Elaeis guineensis] |
| Swissprot | tr|Q9FE20|PBS1_ARATH | 3.00E-147 | Serine/threonine-protein kinase PBS1 |
| trEMBL | tr|M0TMC1|M0TMC1_MUSAM | 7.00E-169 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P03680_001} |
| TAIR | AT3G20530 | 2.00E-155 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000067 | 4040725 | 4054675 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015195
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 230 | 501 | 9.70E-45 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_RLCK-VIIa-1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 1.910 |
| SRR2545915 | Juvenile tuber | 1.560 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 0.850 |
| SRR5643514 | five period of Gastrodia elata | 1.350 | |
| SRR5643515 | five period of Gastrodia elata | 0.970 | |
| SRR5643524 | five period of Gastrodia elata | 0.990 | |
| SRR5643525 | five period of Gastrodia elata | 0.740 | |
| SRR5643528 | five period of Gastrodia elata | 1.090 | |
| SRR5643658 | five period of Gastrodia elata | 0.730 | |
| SRR5643659 | five period of Gastrodia elata | 0.540 | |
| SRR5643660 | five period of Gastrodia elata | 0.520 | |
| SRR5643661 | five period of Gastrodia elata | 0.630 | |
| SRR5643662 | five period of Gastrodia elata | 0.380 | |
| SRR5643663 | five period of Gastrodia elata | 0.260 | |
| SRR5643664 | five period of Gastrodia elata | 0.160 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 0.460 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 0.190 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 0.430 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 0.470 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 0.580 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 0.080 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 0.810 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 0.510 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 1.280 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 0.730 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 1.030 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 1.030 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 0.26 |
| Juven | Juvenile tuber | 0.75 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 0.99 | |
| Mother_Juven | Mother tuber of Juvenile | 0.42 |