Detail information of GWHGAAEX015196/evm.TU.scaffold_64.198


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG00288.00E-36Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein
nrgi|672187275|ref|XP_008813299.1|2.06E-44PREDICTED: calcium-binding protein PBP1-like [Phoenix dactylifera]
Swissprottr|Q9ZPX9|KIC_ARATH2.00E-36Calcium-binding protein KIC
trEMBLtr|M0TLP8|M0TLP8_MUSAM6.00E-40Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P01460_001}
TAIRAT2G466008.00E-36Calcium-binding EF-hand family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006740554784056248+
Transcript Sequence

Network for GWHGAAEX015196

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13833.5EF-hand_840922.10E-12
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.120
SRR2545915Juvenile tuber3.200
SRP108465SRR5643513five period of Gastrodia elata1.280
SRR5643514five period of Gastrodia elata4.420
SRR5643515five period of Gastrodia elata4.640
SRR5643524five period of Gastrodia elata12.690
SRR5643525five period of Gastrodia elata0.390
SRR5643528five period of Gastrodia elata0.780
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.420
SRR5643660five period of Gastrodia elata0.230
SRR5643661five period of Gastrodia elata0.230
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.950
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11.300
SRR6049655Rhizomagastrodiae_C368-T10_good_11.620
SRR6049656Rhizomagastrodiae_C368-T07_good_12.260
SRR6049657Rhizomagastrodiae_C368-T07_good_12.500
SRR6049658Rhizomagastrodiae_C368-T04_good_10.900
SRR6049659Rhizomagastrodiae_C368-T04_good_10.800
SRR6049660Rhizomagastrodiae_C368-T01_good_11.090
SRR6049661Rhizomagastrodiae_C368-T04_good_13.160
SRR6049662Rhizomagastrodiae_C368-T01_good_12.280
SRR6049663Rhizomagastrodiae_C368-T01_good_10.900
SRR6049664Rhizomagastrodiae_C368-T10_good_11.630
SRR6049665Rhizomagastrodiae_C368-T10_good_11.630
SRP279888GastroGastrodia elata tuber 0.04
JuvenJuvenile tuber0.13
Mother_GastroMother tuber of Gastrodia elata 0.15
Mother_JuvenMother tuber of Juvenile 0.24