Gene detail

Detail information of GWHGAAEX015207/evm.TU.scaffold_64.210

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|743814289\|ref\|XP_010929989.1\|	4.10E-22	PREDICTED: dentin sialophosphoprotein-like isoform X2 [Elaeis guineensis]
trEMBL	tr\|V4TNJ0\|V4TNJ0_9ROSI	7.00E-21	Uncharacterized protein {ECO:0000313\|EMBL:ESR51406.1}
TAIR	AT4G00920	1.00E-10	COP1-interacting protein-related

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000067	4276486	4302187	+

Transcript Sequence
>GWHTAAEX015207 AAAAATACAATAATTTAAAGATTGATTTGAAATTTTCGCTGTGACATGGAGGAGAGTAGCTTTGAGCCAAAACCCTAATTTCTATCTCGTCAGTTCTAGGGATGGCGAACAGCGGTTCGCCTTCCCTTTTTCCGCCTCATCTGCATACAATATTCGTTGACACGAGCATCGACACGCATCTCGCGATGGCTGTCCCCCTCCACTACACCGTCAGGGAAGTCAAGGAACAAATAATGGCAGAGCATGCTCGTTGCTTCCAGGACATTGGTGAAATCTCAATTAGAGCGATCAAGGTGAGACGCCGAGGTTTCTTCTACAACCTGGTAGACTCTATGTGTGTGTGGAATGCCTTCTATGGATTCAAGGGAAGTTGGTCTGTTAGTATCGATGCTGTGCCGATGCACCCTTTGAAGAAAACAGTGGTGGCTACTAGCGAGGTAACACATGCACATTCAGAGCACCAAATCTATGAAGGTGTGGTGACATATTCTTGTGAACCTGAGAAAAATTCAAGCTTTGATGGGCATGAAAATCTTAATCCAATAATTGTGGGCAGGGAACATGTGTGTGGTCCTAATATGCTGATTGATCAGGAGAAAAATGGCGTAAGGAAGAATGGCGTTGAAACTAGTGATGCCGTACCTGTGACTTATAATGGAGAGAGGAGTAAGACATTTCAGCAAGATAAGTTACTTGAAAGCCTGTCACAAAATCATCCTAAGAAGGACAAAACGGATAAAAAGTTTGAGGATAAAGTGCATGAAGAACATCTCCAGAGTCCCATAGAAAGCGGATTGAGTAGAACTGAAAATATTGATGAGCATCTTGAGGATAGCAGAGGGGTCAATAACGTGAAACTTCCTACATCCTTAGAAGCATTGACAGGTGAATTGGCCCTCAAGAATGTACCACAAGGAAAGGGGAGTATGACATCACAGCAAGACAGGTTACTTGGAAGCCAACCACAAAACTATTTAGAGGAGAAAAAGGGTAAAAAGGTTGAAGATAAATTGCATGAAGCGCATCTTGAGAGTCAAATAAAAAGTGGTTTGAATGGAAGTGAAAACATTGATGAGTATCTTGAGGATGGTAGAAGGGATAAAAATGAGAATCTTCCTACTTTAGTAAGATTGACAAGTGAACTGCTCCTCAAGAACACCAAGCCACTTCAGAATTCCCCTGGGAAGAAGTATAAGAAAAGAAAAAGGAAGAACTGCAAACCGCATAAAAAAGCTCCTCTTGCTATGCCATTTAATATTCTTGTTCCTCAATCATCTCTAGCAACAGTCAACCCTCCCAGTCTAGGGAAAGATGCTGATTCATCTAGCTTCTTTGAAAAGTGTCCAAATAAATCAAATAATAATTTAACATTATTACCAAATGGTGACGGAGGCATGAGAATAGCCTCTGAGGCTGCAAGTTCTTTTGAAGTTATTAATCTGAAAGAAAAAGATGGGCATTTTATAAAAGAACCTATTGCAGATCAGATCCTTCGATTCAATTCTGACAATCAAAGGGAAAAGCATTTGTATTTGGATCAAGCAACTGGTAGTGATGTTAGATTTAAAGAACCTGAAGAGGCTAAGATTTCTCCCCGAGCACCTTATGAGTTGCCAACTTTGTTTTGCTGCAGCACAGATAAGTTAACTAATCAATCAAGCAAAGGCTTAGAACCAAACGCAGCAAATCATCAGCAGAATGGGGAGCTTGATACTGCAAGTTGTAGCACAGTGCTGAACCCAACAAAGAGCAATGCTGAACCTGTAATTGAGAAGGCAGATTTTTTGACATTTGGTGAATCATTCTTGTATGAAAAGCATACCACTAATTCAGATTTTGATAGTATCTCAGGTGAAATGCATCACAGTTTAGATAAGGAAGCTGGTGCTGCAGTCAATTTGAAAGGAGGTAATGAGCAAAGGCCCTTAACACAAGTTTATTCTGAAGTTCAACATATATTACCACATAGCAGAAAAAAGTTAAAAGTTGAGTCATCCGGAGTTTGTGTCGCTACAAAAGTAAACGTAGATCAAGAGCATTTCAAGCCTGTTAGTGCTCTAGCTTCACTGAAGCGTGATTATAATGATGAGTCCAATGCTGCAAAATGCATCAAGCTTGCTGATTCAAAAGCCAATGGAGGCTATTGCGAGAATGCTTCGATCAAAATCTGTTCATCCCCCAGCAAAATTCAAGTCTCTCACTTGAATTCAAGTAAATCTCTAATTGACCCGCTTCATATTTCGAGTGAAGCATCTATTTCACTTGCTAAACAACTTCCAAAGATCAAAATCACTTCACAGCCAGATTCTGTAGTTTTTGCCACGCCATGCCACAGCTGGAAAATTTCAAAGGACAAACTAGCTGAAGTAGGATATCCGGAAACAGATGTTTCTTTGTCAAAATCCAACAGAGAAGTAATAGGATCATCCAATCAAAAAATAGAGCATCTTAGTGTAGATGCAGAGGCAACAGTCTCTGATGATGACTTTTCAAGGCTTACTAAAATCTCTAAGGTGAGTCCATTAGATCTCTCAAGTCTCGAGCCACAGGATATATGTGACTTATCCAATACAAAAATAATCATTGAAGATGCTGCGGCCCCTATTCTGTCACATGAAGACTCTAAATGTGATAGGAAGAATTCCAAAAAAAATGCATTGAAACCTCAAGCTTCTTCAAAAACGAGCAAATTTGTGGAGCTTCGCAGGCATGGCAATGCTGGCATAAATTTCAGTGATTATTTTGTTCGCAAGGAAAGGAAGCATGCTTCTGCTATTTTTGCAGTCAAACCTCCCACTGATTCAGTACAATCAGATTCACATAAATTTCATAGAGTCAAAGATCCGACTCATGAAAATGATAATCGTCATTGTGATGTCGTCGATTTAGCAAAAAAGTATGTAGTTAAAAAACCAAAACAATCAAATATGCAGAACTCTTTGGAAAGGGTTGAATCAATCTCATTTCTCAATAAGGATCTTGAATCTGCACCAATGAAGTGCTTCAATTCTTCACTCAATAGCAGTACTGTAGGTAATGCTGTTGGCTTAAATAATTTTGGTGTTTCTACAAGCAAAGACACTGCCAATCAGGCAGTATCAAGTGACAGCACTGAGGACATTCCAGATCATCTAAGGCGGTTTCGAGTTGTTAGAAAGATTCCAATAAGAAGGCACTCTAAACAAGTTTTACATGAACATGATGAACGTGTGTGTAGGCCAGAAATGTTGATTAATCATGAAAAGGTTGGTGCAGGAAAGAATGAAGGCAAGACTCCTGACCTTGAAGCTAGTGAAGGCATGCCTGCAGTTTGCAGTAATGGGGAGCGATATAAAACATCACAGAAGGATAAGTTACTTGAAAGTCAACCACAGGATCATTCGGAAAAGGAGAAGAAGGATAAAATAGTAGAGAATAAGTTGCATGAACCGCATATTGAGATTCACATAGAATGCGAAATGAGTAGAAGTGAGCCTGTTGAGGATAGCAAAGGGGACAAAAACGAGAATCTTTCTACATCTTTAGGACTAACAAGTATGATGCTGTCCCTCGGGAATGCCATACTGCCTAAAAATTCCTCTGAAAGGAAACATTTGAAAAGAAAATCAAAGAAGCCCAAGTACAAGTTGACCCTTGTTCCTCAATCGTCTCATGCAACACTAGACCCTCACAGTTTTGGGAAAGAGGCTGATGTATCTAGCGTTTTAGAAAAGCGTCCTACTGAACCAAATTCTCATTTACCATTGTCAAGTGACAGCAGAGATACGAGGATGGCTTCTGATGCTACAACTTCATTTGAAGGTATTAGCATGAAAAAAAAGGGTGGGCATTTAATGGAAGAACCTATTGCAGATCATACGATTCTTCTAGTTAATTCTGGCGATCAAAGGGAAATTCATATAAATTTGGGTCAAGAAACCAGTGGTGAAGTTGGTCAATCAAGCAAAGGTTTAGAATCGAAGGAAATAAAGAATACTTCAGCTGTTCATGCAGTGAATTTTTCCACTGATTCAATACAAATGAAGAGCTTCAATTCTAAGGCTCTTGATACTACTGCAGTCGAGGATTCTAAGGCTGGTCATGCAGATAAGCAGAACCCTTTGAAAAGGATTGAATCAAACTCATCTCTCCATAAGGATCATGAATTTGCATATTTGTTTTATTCACCAAGAAGAAACTCTGTTGTAGGCATAAATAATGTTGGTGTTTCTCCAAGTGAAGGCATTACTATTCAGGCAGCATCAAGTGACAGCACCGAGGACATTCCGGATCATTTAAGGCGGTTTCGAGTTGTTAGAAAAGTACCCATTAGAAGGTTCAAGTGA

Network for GWHGAAEX015207

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module8

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX015207
MANSGSPSLFPPHLHTIFVDTSIDTHLAMAVPLHYTVREVKEQIMAEHARCFQDIGEISIRAIKVRRRGFFYNLVDSMCVWNAFYGFKGSWSVSIDAVPMHPLKKTVVATSEVTHAHSEHQIYEGVVTYSCEPEKNSSFDGHENLNPIIVGREHVCGPNMLIDQEKNGVRKNGVETSDAVPVTYNGERSKTFQQDKLLESLSQNHPKKDKTDKKFEDKVHEEHLQSPIESGLSRTENIDEHLEDSRGVNNVKLPTSLEALTGELALKNVPQGKGSMTSQQDRLLGSQPQNYLEEKKGKKVEDKLHEAHLESQIKSGLNGSENIDEYLEDGRRDKNENLPTLVRLTSELLLKNTKPLQNSPGKKYKKRKRKNCKPHKKAPLAMPFNILVPQSSLATVNPPSLGKDADSSSFFEKCPNKSNNNLTLLPNGDGGMRIASEAASSFEVINLKEKDGHFIKEPIADQILRFNSDNQREKHLYLDQATGSDVRFKEPEEAKISPRAPYELPTLFCCSTDKLTNQSSKGLEPNAANHQQNGELDTASCSTVLNPTKSNAEPVIEKADFLTFGESFLYEKHTTNSDFDSISGEMHHSLDKEAGAAVNLKGGNEQRPLTQVYSEVQHILPHSRKKLKVESSGVCVATKVNVDQEHFKPVSALASLKRDYNDESNAAKCIKLADSKANGGYCENASIKICSSPSKIQVSHLNSSKSLIDPLHISSEASISLAKQLPKIKITSQPDSVVFATPCHSWKISKDKLAEVGYPETDVSLSKSNREVIGSSNQKIEHLSVDAEATVSDDDFSRLTKISKVSPLDLSSLEPQDICDLSNTKIIIEDAAAPILSHEDSKCDRKNSKKNALKPQASSKTSKFVELRRHGNAGINFSDYFVRKERKHASAIFAVKPPTDSVQSDSHKFHRVKDPTHENDNRHCDVVDLAKKYVVKKPKQSNMQNSLERVESISFLNKDLESAPMKCFNSSLNSSTVGNAVGLNNFGVSTSKDTANQAVSSDSTEDIPDHLRRFRVVRKIPIRRHSKQVLHEHDERVCRPEMLINHEKVGAGKNEGKTPDLEASEGMPAVCSNGERYKTSQKDKLLESQPQDHSEKEKKDKIVENKLHEPHIEIHIECEMSRSEPVEDSKGDKNENLSTSLGLTSMMLSLGNAILPKNSSERKHLKRKSKKPKYKLTLVPQSSHATLDPHSFGKEADVSSVLEKRPTEPNSHLPLSSDSRDTRMASDATTSFEGISMKKKGGHLMEEPIADHTILLVNSGDQREIHINLGQETSGEVGQSSKGLESKEIKNTSAVHAVNFSTDSIQMKSFNSKALDTTAVEDSKAGHADKQNPLKRIESNSSLHKDHEFAYLFYSPRRNSVVGINNVGVSPSEGITIQAASSDSTEDIPDHLRRFRVVRKVPIRRFK

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	59.750
SRP064423	SRR2545915	Juvenile tuber	50.490
SRP108465	SRR5643513	five period of Gastrodia elata	14.730
	SRR5643514	five period of Gastrodia elata	13.220
	SRR5643515	five period of Gastrodia elata	11.110
	SRR5643524	five period of Gastrodia elata	11.980
	SRR5643525	five period of Gastrodia elata	11.720
	SRR5643528	five period of Gastrodia elata	8.960
	SRR5643658	five period of Gastrodia elata	13.120
	SRR5643659	five period of Gastrodia elata	15.540
	SRR5643660	five period of Gastrodia elata	21.070
	SRR5643661	five period of Gastrodia elata	14.730
	SRR5643662	five period of Gastrodia elata	13.540
	SRR5643663	five period of Gastrodia elata	15.360
	SRR5643664	five period of Gastrodia elata	16.270
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	20.590
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	20.820
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	17.430
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	27.440
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	23.010
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	32.230
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	23.200
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	24.790
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	12.870
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	16.390
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	12.660
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	12.660
SRP279888	Gastro	Gastrodia elata tuber	17.69
	Juven	Juvenile tuber	23.76
	Mother_Gastro	Mother tuber of Gastrodia elata	7.78
	Mother_Juven	Mother tuber of Juvenile	12.24