Gene detail

Detail information of GWHGAAEX015227/evm.TU.scaffold_64.234

Functional Annotation

Database	Orthologs	Annotation
KOG	KOG1479	Nucleoside transporter
nr	gi\|595945957\|ref\|XP_007216101.1\|	hypothetical protein PRUPE_ppa018615mg [Prunus persica]
Swissprot	tr\|Q9M0Y3\|ENT3_ARATH	Equilibrative nucleotide transporter 3
trEMBL	tr\|M5XDY4\|M5XDY4_PRUPE	Uncharacterized protein {ECO:0000313\|EMBL:EMJ17300.1}
TAIR	AT4G05120	Major facilitator superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000067	4624884	4631711	+

Transcript Sequence
>GWHTAAEX015227 ATTCACGGAATTTGTTGGGAACCTGATCAAGGCATTGAGTCTGATTTCCAATTCTCTTGCGTCATTTAAATTTCATAACTCCATCACATTTCTAATTGCGTAATCTTATTTTCACATCTGCTGCTTATTACTTCATATGTATTCTAACATAAGGGTTGGTGTACTTGATTACACAAAGCAGTCTAAGATACATCAAACAGGAATCATCACCTACAACCATTCATTCGGCATGCCTTTATGGCTAATCACGGGACTCCAAATACATCTGTTGCTGTCTAGCTAACTTTACAAGCAGATAGTGCTTACTTCAGGTTTTTCTTCTGCGCTTGGAATGAAGTCAGGGATGAAATTTGAGTTATATATGAATCCAATTTGTATATTAAAACATGCTAAATTATTTTCCTAAAAGTGATCTATATTCTAGAATATCCTTAAATCGCAAAATGGCGGATCTATTTTCTCCTATCTCGGGTCAGAATAGGTTGTAGTTGATCTCGTGAAGCATTGGATCTATTACTATTTATTTTAGAGAATACAACATTAAGGACAGTAGTTTCATTTCAGATCTTTCTATTTTGCTTCTAGAATTTGTTCATAATTTTTCAAGAATCTTACTGTACCCATTCAAGCAGCTAGGATCTTTAATTGCAAGTACAAATTCTAGATGAAGAGAAGATGGCTCAGAAACCAAGAAAAATTGGGTCAGTTCTTCTAGTTTCAGGTTCAAGGAGCAGACGAAGGAATCGGGATAGATCTTCTTGCTGATTAAAAGTGGTTTGATTGATCAAAGGAACACAGGACAGACCTTCTCGCCGCTGGTATAGGGATCGATCGAAGAAAAGTTTGGATTGGTTGGAGCAAAGTAATCATGACTTACAATTCTGAGAGTGACAAAGAAGTAAAAAAAAAGGGCATATTTGCTGCTGTTGTTGTTTGCTGGTTCCTTGGAAACGGATCTCTCATCTCATGGAACAGCATGTTAACTATTGTAGACTACTATGTTAAAGTATACCCGAGGTACCATCCCACAAGAGTACTTACTCTGGTCTATCAACCTTTCGCCTTCACAACTTGCGCAATACTCACATATCATGAAGCAAAGCTCAATACTAGAACAAGGAACATATTTGGTTACTCCCTCTTTTCCATAAGTACTTTTCTTGTGATTATTATAGATTTGGCATCCTCCGGAAAAGGGGGCGTTGGAACCTTTATAGCCATATGCCTTATTAGCGCAGCATTTGGCATTGCTGATGCTCATGTTCAGGGGGGGATGGTTGGTGATTTGTCCTTCATGCCACCAGAGCTCATTCAGTCGTACTTTGCTGGTTTGGCTGCATCCGGAGCTTTAACATCTGTTCTAAGGATTATTACAAAATTAGTTTTTGAGCATAGCCATGATGGCCTTCGAAAAGGAGCGATGTTGTTCTTTGCTCTCTCAACATTTTTAGAACTGCTATGCGTTCTTCTTTATGCTCATATCTTTCCGAATCTTCCAATCGTGAAGTATTATCGGTCAAAAGCGGCTTCAGAAGGATCAAAGACGGTTTCTGCTGATCTTGTGGCTGCCGGCATCCAGTTGCAGAACAAACAAGAGGTAGAAGAAGATCCAGTGCAACAAGAGCGATTGACCATCACACGACTACTGATGCAGAACTTGGATTATGCATTAGACATGTATCTTATTTATGTTCTGACACTGTCAATATTCCCTGGATTTCTGGCTGAGGATTCTGGAAGTCATGCCCTGGGATCATGGTATGCTATAGTCATTATTGCACTGTACAACTTCTTTGACCTCATTGGAAGGTACACACCGATGATAAAACACTTCCGAATCAAAGACCGGAGAGGACTCATGATTGCTGTTCTTTCACGTTTCCTGTTCATTCCCGCATTCTATTTTACATCGAAAAATGGAGGGCAGGGTTGGATGATCATGCTTACGTCTTTGTTAGGGCTAACCAACGGCCATCTCAGTGTTTGTGTTATAACAGAGGCACCAAAGGGATACAAGGGGCCAGAAGCAAATGCTCTGGGAAATGTGCTAGTTATGTTTATTTTAGGTGGAATAGCTTCAGGTGTTGCATTAGATTGGTTGTGGCTCATTGGCAAAGGCTGGTGAGGCGATTGATTCAGGCCATAGTTTAGATAAATATTGTTTATGATAGTAATTATTGTCATTTGTATAAAACACACACATATATATATATATA

Network for GWHGAAEX015227

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01733.17	Nucleoside_tran	117	412	9.80E-39

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:1901642	Biological Process	nucleoside transmembrane transport
GO:0005337	Molecular Function	nucleoside transmembrane transporter activity
GO:0016021	Cellular Component	integral component of membrane

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.170
SRP064423	SRR2545915	Juvenile tuber	6.740
SRP108465	SRR5643513	five period of Gastrodia elata	5.200
	SRR5643514	five period of Gastrodia elata	3.670
	SRR5643515	five period of Gastrodia elata	4.130
	SRR5643524	five period of Gastrodia elata	4.820
	SRR5643525	five period of Gastrodia elata	7.090
	SRR5643528	five period of Gastrodia elata	5.520
	SRR5643658	five period of Gastrodia elata	7.060
	SRR5643659	five period of Gastrodia elata	6.210
	SRR5643660	five period of Gastrodia elata	6.970
	SRR5643661	five period of Gastrodia elata	10.430
	SRR5643662	five period of Gastrodia elata	11.420
	SRR5643663	five period of Gastrodia elata	9.890
	SRR5643664	five period of Gastrodia elata	8.860
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	3.540
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.320
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	3.220
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	2.920
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	2.900
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	2.740
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.220
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.350
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	3.310
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	2.730
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	3.930
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	3.930
SRP279888	Gastro	Gastrodia elata tuber	5.58
	Juven	Juvenile tuber	5.25
	Mother_Gastro	Mother tuber of Gastrodia elata	9.72
	Mother_Juven	Mother tuber of Juvenile	6.89