Detail information of GWHGAAEX015237/evm.TU.scaffold_64.246


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|108804058|ref|YP_643995.1|4.00E-42FAD-dependent pyridine nucleotide-disulfide oxidoreductase [Rubrobacter xylanophilus DSM 9941]
KOGKOG24950NADH-dehydrogenase (ubiquinone)
nrgi|672161178|ref|XP_008800394.1|0PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial-like [Phoenix dactylifera]
Swissprottr|F4JJJ3|NDB3_ARATH0External alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial (Precursor)
trEMBLtr|M0SUC8|M0SUC8_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr4P33660_001}
TAIRAT4G050200NAD(P)H dehydrogenase B2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006748713844877787-
Transcript Sequence

Network for GWHGAAEX015237

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module14

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF07992.13Pyr_redox_2583774.10E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity
GO:0005509Molecular Functioncalcium ion binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms4.550
SRR2545915Juvenile tuber6.060
SRP108465SRR5643513five period of Gastrodia elata15.650
SRR5643514five period of Gastrodia elata16.930
SRR5643515five period of Gastrodia elata46.340
SRR5643524five period of Gastrodia elata17.460
SRR5643525five period of Gastrodia elata8.920
SRR5643528five period of Gastrodia elata110.240
SRR5643658five period of Gastrodia elata21.100
SRR5643659five period of Gastrodia elata16.020
SRR5643660five period of Gastrodia elata15.540
SRR5643661five period of Gastrodia elata23.300
SRR5643662five period of Gastrodia elata52.400
SRR5643663five period of Gastrodia elata14.000
SRR5643664five period of Gastrodia elata5.150
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.800
SRR6049655Rhizomagastrodiae_C368-T10_good_113.980
SRR6049656Rhizomagastrodiae_C368-T07_good_19.960
SRR6049657Rhizomagastrodiae_C368-T07_good_14.580
SRR6049658Rhizomagastrodiae_C368-T04_good_15.610
SRR6049659Rhizomagastrodiae_C368-T04_good_15.060
SRR6049660Rhizomagastrodiae_C368-T01_good_116.110
SRR6049661Rhizomagastrodiae_C368-T04_good_18.890
SRR6049662Rhizomagastrodiae_C368-T01_good_128.390
SRR6049663Rhizomagastrodiae_C368-T01_good_122.860
SRR6049664Rhizomagastrodiae_C368-T10_good_118.200
SRR6049665Rhizomagastrodiae_C368-T10_good_118.200
SRP279888GastroGastrodia elata tuber 6.81
JuvenJuvenile tuber0.56
Mother_GastroMother tuber of Gastrodia elata 60.84
Mother_JuvenMother tuber of Juvenile 44.49