Detail information of GWHGAAEX015244/evm.TU.scaffold_65.6


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428775207|ref|YP_007166994.1|4.00E-61signal peptidase I [Halothece sp. PCC 7418]
KOGKOG01711.00E-77Mitochondrial inner membrane protease, subunit IMP1
nrgi|218190459|gb|EEC72886.1|2.74E-109hypothetical protein OsI_06670 [Oryza sativa Indica Group]
Swissprottr|Q8H0W1|PLSP1_ARATH2.00E-98Chloroplast processing peptidase (Precursor)
trEMBLtr|B8AFB9|B8AFB9_ORYSI1.00E-109Putative uncharacterized protein {ECO:0000313|EMBL:EEC72886.1}
TAIRAT3G245901.00E-77plastidic type i signal peptidase 1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000063311687330946-
Transcript Sequence

Network for GWHGAAEX015244

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10502.8Peptidase_S261802801.80E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03100lepB Protein export map03060

Gene Ontology

GO term OntologyName
GO:0006508Biological Processproteolysis
GO:0008236Molecular Functionserine-type peptidase activity
GO:0016021Cellular Componentintegral component of membrane
GO:0016020Cellular Componentmembrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms15.520
SRR2545915Juvenile tuber11.890
SRP108465SRR5643513five period of Gastrodia elata12.490
SRR5643514five period of Gastrodia elata14.730
SRR5643515five period of Gastrodia elata11.990
SRR5643524five period of Gastrodia elata13.590
SRR5643525five period of Gastrodia elata15.290
SRR5643528five period of Gastrodia elata18.390
SRR5643658five period of Gastrodia elata17.770
SRR5643659five period of Gastrodia elata9.800
SRR5643660five period of Gastrodia elata9.130
SRR5643661five period of Gastrodia elata9.520
SRR5643662five period of Gastrodia elata10.410
SRR5643663five period of Gastrodia elata9.700
SRR5643664five period of Gastrodia elata9.710
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.120
SRR6049655Rhizomagastrodiae_C368-T10_good_115.070
SRR6049656Rhizomagastrodiae_C368-T07_good_19.910
SRR6049657Rhizomagastrodiae_C368-T07_good_19.050
SRR6049658Rhizomagastrodiae_C368-T04_good_19.020
SRR6049659Rhizomagastrodiae_C368-T04_good_19.270
SRR6049660Rhizomagastrodiae_C368-T01_good_18.910
SRR6049661Rhizomagastrodiae_C368-T04_good_18.760
SRR6049662Rhizomagastrodiae_C368-T01_good_110.520
SRR6049663Rhizomagastrodiae_C368-T01_good_19.340
SRR6049664Rhizomagastrodiae_C368-T10_good_110.740
SRR6049665Rhizomagastrodiae_C368-T10_good_110.740
SRP279888GastroGastrodia elata tuber 9.55
JuvenJuvenile tuber11.58
Mother_GastroMother tuber of Gastrodia elata 15.45
Mother_JuvenMother tuber of Juvenile 9.79