Detail information of GWHGAAEX015249/evm.TU.scaffold_65.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|218779711|ref|YP_002431029.1|1.00E-06CaCA family Na+/Ca+ antiporter [Desulfatibacillum alkenivorans AK-01]
KOGKOG23996.00E-168K+-dependent Na+:Ca2+ antiporter
nrgi|743821091|ref|XP_010931951.1|0PREDICTED: cation/calcium exchanger 5 [Elaeis guineensis]
Swissprottr|O04034|CCX5_ARATH2.00E-168Cation/calcium exchanger 5
trEMBLtr|A0A022R9Q8|A0A022R9Q8_ERYGU5.00E-171Uncharacterized protein {ECO:0000313|EMBL:EYU37072.1}
TAIRAT1G089606.00E-168cation exchanger 11

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000063708724718628+
Transcript Sequence

Network for GWHGAAEX015249

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01699.23Na_Ca_ex1042474.30E-19
PF01699.23Na_Ca_ex3955442.30E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0055085Biological Processtransmembrane transport
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms5.380
SRR2545915Juvenile tuber6.670
SRP108465SRR5643513five period of Gastrodia elata13.670
SRR5643514five period of Gastrodia elata13.300
SRR5643515five period of Gastrodia elata12.500
SRR5643524five period of Gastrodia elata12.150
SRR5643525five period of Gastrodia elata13.100
SRR5643528five period of Gastrodia elata10.250
SRR5643658five period of Gastrodia elata12.920
SRR5643659five period of Gastrodia elata14.880
SRR5643660five period of Gastrodia elata14.550
SRR5643661five period of Gastrodia elata14.790
SRR5643662five period of Gastrodia elata11.070
SRR5643663five period of Gastrodia elata16.260
SRR5643664five period of Gastrodia elata9.510
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_112.150
SRR6049655Rhizomagastrodiae_C368-T10_good_113.210
SRR6049656Rhizomagastrodiae_C368-T07_good_112.490
SRR6049657Rhizomagastrodiae_C368-T07_good_112.560
SRR6049658Rhizomagastrodiae_C368-T04_good_110.200
SRR6049659Rhizomagastrodiae_C368-T04_good_110.690
SRR6049660Rhizomagastrodiae_C368-T01_good_111.970
SRR6049661Rhizomagastrodiae_C368-T04_good_112.600
SRR6049662Rhizomagastrodiae_C368-T01_good_113.310
SRR6049663Rhizomagastrodiae_C368-T01_good_111.100
SRR6049664Rhizomagastrodiae_C368-T10_good_114.120
SRR6049665Rhizomagastrodiae_C368-T10_good_114.120
SRP279888GastroGastrodia elata tuber 12.51
JuvenJuvenile tuber14.85
Mother_GastroMother tuber of Gastrodia elata 9.50
Mother_JuvenMother tuber of Juvenile 12.02