Detail information of GWHGAAEX015260/evm.TU.scaffold_65.24


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392412115|ref|YP_006448722.1|1.00E-09tetratricopeptide repeat protein [Desulfomonile tiedjei DSM 6799]
KOGKOG11742.00E-129Anaphase-promoting complex (APC), subunit 7
nrgi|720085586|ref|XP_010243561.1|0PREDICTED: anaphase-promoting complex subunit 7 [Nelumbo nucifera]
Swissprottr|Q8VY89|APC7_ARATH0Anaphase-promoting complex subunit 7
trEMBLtr|M0T221|M0T221_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr5P26960_001}
TAIRAT2G390902.00E-129tetratricopeptide repeat (TPR)-containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006311514821225902+
Transcript Sequence

Network for GWHGAAEX015260

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03354APC7 Ubiquitin mediated proteolysis map04120
Cell cyclemap04110
Cell cycle - yeastmap04111
Meiosis - yeastmap04113
Oocyte meiosismap04114
Progesterone-mediated oocyte maturationmap04914

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms28.870
SRR2545915Juvenile tuber24.180
SRP108465SRR5643513five period of Gastrodia elata18.460
SRR5643514five period of Gastrodia elata23.000
SRR5643515five period of Gastrodia elata18.490
SRR5643524five period of Gastrodia elata19.570
SRR5643525five period of Gastrodia elata20.840
SRR5643528five period of Gastrodia elata13.790
SRR5643658five period of Gastrodia elata16.570
SRR5643659five period of Gastrodia elata22.120
SRR5643660five period of Gastrodia elata26.860
SRR5643661five period of Gastrodia elata22.080
SRR5643662five period of Gastrodia elata20.080
SRR5643663five period of Gastrodia elata23.660
SRR5643664five period of Gastrodia elata22.500
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_128.830
SRR6049655Rhizomagastrodiae_C368-T10_good_131.250
SRR6049656Rhizomagastrodiae_C368-T07_good_129.740
SRR6049657Rhizomagastrodiae_C368-T07_good_132.310
SRR6049658Rhizomagastrodiae_C368-T04_good_134.570
SRR6049659Rhizomagastrodiae_C368-T04_good_134.560
SRR6049660Rhizomagastrodiae_C368-T01_good_134.780
SRR6049661Rhizomagastrodiae_C368-T04_good_134.730
SRR6049662Rhizomagastrodiae_C368-T01_good_122.490
SRR6049663Rhizomagastrodiae_C368-T01_good_128.490
SRR6049664Rhizomagastrodiae_C368-T10_good_122.820
SRR6049665Rhizomagastrodiae_C368-T10_good_122.820
SRP279888GastroGastrodia elata tuber 32.32
JuvenJuvenile tuber31.70
Mother_GastroMother tuber of Gastrodia elata 18.34
Mother_JuvenMother tuber of Juvenile 23.79