Gene detail

Detail information of GWHGAAEX015261/evm.TU.scaffold_65.25

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|521467107\|ref\|YP_008154472.1\|	4.00E-11	hypothetical protein SCE1572_40550 [Sorangium cellulosum So0157-2]
KOG	KOG0379	0	Kelch repeat-containing proteins
nr	gi\|672187543\|ref\|XP_008813362.1\|	0	PREDICTED: acyl-CoA-binding domain-containing protein 5-like [Phoenix dactylifera]
Swissprot	tr\|Q9MA55\|ACBP4_ARATH	9.00E-65	Acyl-CoA-binding domain-containing protein 4
trEMBL	tr\|M0SHA8\|M0SHA8_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P23920_001}
TAIR	AT5G18590	0	Galactose oxidase/kelch repeat superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000063	1247948	1308438	-

Transcript Sequence
>GWHTAAEX015261 AGGAGAGAGGAGAGAGGAGAGAGGTTCTTTTTTCACTCCAAGCATCAGTCAATTATTTGCTTCCGAAATCTCTCACTTCTAAGCATCCAAAATCCCACTCAATCTCTCCTCGTTGAACCCGCAGCTCGTCTCATCCTAGGGTTTCTTTGGCATCGCATTTAGTCGCCTGGCGGCAGTCAGATAACTCCGGCGACCACTCGCTTCTCGGCGTCGATACCTCTGCAGCCAATGCCGAAGATATTCGGCTTTTCCCGCCGTCGAACTAAGTTAGGGAGGCTAAAAGTGGGAGATCCTTCCCACGGGACCCAGACTCAGAGCCCCGCCCACCATACTAAAAGCTCTTTTCAGAACAATGAAGAACCTGCAGTTGGGGCGTCAGCTAGTGGGCGGTCTGAGGACCATTATTGTGACTGCTCCATGGCTGGATTGGGTATTAACAAAAGCGGTGTTGGATGTTCTGAGAACTGGATGGTGGTGCCGACAGCTGGGGACCAACCAACTCCTCGATTTCAGCACGGAGCAGCCATCGTTGGGAGTAAAATGGTTGTGGTTGGTGGGGATTCTGGCAACGGGATGCTTGATGATACAATGATACTTAATTTGGACAAACTCTCATGGGTTGCAACTTCCAAGATTTATGGTTCACCAACAGAGTTGAAGAGCCCCGCATGTAAAGATCATTGTTTGGTCTCTTGGGGAAAACTGGTACTTTTAATTGGAGGCAAAATTGACCCTCACTGTGACGGAGTAGCTGTTTGGTCCTTTGATGTTGATGCGGAATGCTGGACGCATGTGGAGGTGAAAGGTGATGTTCCGGTTGGTCGTAGTGGTCATACTGTCATTCGAGCAGGTTCAATCCTCATTCTTTTTGGCGGTCAAGATTTTAAAGGGAGAAGACTTAATGATCTGCACATGTTTGATCTAAAGTCATCAACATGGCTTCCATTGCATTACACCGGAGCTAGGCCATCACCAAGATCAAATCATGTAGCTGCTCTTTATGATGATAGATTTTTTTTTGTGTTTGGAGGGCAATCAAAGTCCAAGATTTTGAATGATCTCTACTCTCTTGACTTTGAAACTATGGTATGGTCAAAAATAAAAATCAAAGGACATCATCCGTCCCCGAGGGCTGGTTGTCGTGGCATCCTTTGTGGAAACAGATGGTATATTGTTGGGGGTGGAAGCAAGAAAAAACGATATGCTGAAACCATGATCTTTGATGTTGCAAGACTTGAGTGGTCTGTTTCTGTTACATCTTCTAATGACTCTGTAGCTACCAGTAAAGGATTTAGTCTGGTCTCTGCGCACCACAACGACAAGCTATTTCTAGTTGCCTTTGGAGGAAACAGAAAAGAGCCATCAAATCAGACTGAAATATTGGTAATGGTAAAAAATGAACACTCAATGAGCTGGAGATCTGCACCTGGTTCTGACGTTTTGCCTTATAAAGATAGCTTACAAAACCTCAAAGTTCTTCCTGCTCTTCTTGGCAACAATCCATTGCCACGTTCTGTTGGGGGTTTTGGTGCTGCTTCCACGGCGGATCATCGTGCTTCTGGTAGGAAATCACTGTCTGAATCTTCCATCAATCCTAATGTTTGTTCTGGCACTGTTTCACTTCAAACGCAATTTCGTAAGGAAGAAGAGTACGATGCAAACCATATGATACAAAAAACTTTTGAAGAGGGAAAATGTAAGGTGGGCAATAGTGTCTCGGAACGGTATACACCAAGCTCGCAGGTGGTAGATACTATGCACACGCCGCTAGAAACTACAGTTAAGGTAGATATAGCAGGGATTCTGGCTTTGTCCGAGGATAATATCCTAACAATTGATGATGATAATTCACATCCGTTCCAGAATAAGCCAACTGATGGCTTTTCTCAGACAGAAACTGATGAAGGAGGCACAGTTCCTTCTACAAACACCGGGAACATCCATCATATGTGCAAAGCAAAGATTGCGAACTTGGCGAGGAAAAATGTGATGCTTGAAGGGCAACTTTCTGCTGCACTGTCGAATCAAGAAGCTAACGAAAAAAATCTGTCTTCGTTCATTAAATGCAGGCAGGAAATGGAGAAGAGGCTCAATGATGCTTTGAAGGAAGTTGATTTGTTGAAGGAGAAACTAACAAATTTGGAACTTGTTCAAGAGGAGGCAAATAGCATCTCTAACATGGTTCATTCGGATAATGTGAGGCTTGAACATGATGTTGCTTTTCTCAAAGCTGTTTTAGATGACACCCAAAAGGAGCTGCACTCTACTCGGGGAGTACTTGCTGGAGAAAGAGCAAGAGCTTTTCAGCTTCAGGTGGAAGTCTTTCATCTGAAGCAAAGACTGCATTCCCTCGAGAACAGAGCGCCTACACCCAGAAAGCCTTTCCACTTGTAATTGAATCCAACTTGCATTCTTTCCTTTTTTTCCTTTATAGGTTGCTGAATCTTAAATGTAATTGGATTTGAATTATTAGTGTAAAAACAATTACAATACAAATATATTATTTTGCTTTTGTTTTGTTGCCCTCAAAATTCTTACTAGGAAAAAAACGTG

Network for GWHGAAEX015261

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13418.5	Kelch_4	199	240	3.20E-07
PF13418.5	Kelch_4	249	297	1.30E-07

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.580
SRP064423	SRR2545915	Juvenile tuber	10.140
SRP108465	SRR5643513	five period of Gastrodia elata	7.540
	SRR5643514	five period of Gastrodia elata	9.160
	SRR5643515	five period of Gastrodia elata	7.280
	SRR5643524	five period of Gastrodia elata	8.670
	SRR5643525	five period of Gastrodia elata	4.580
	SRR5643528	five period of Gastrodia elata	3.150
	SRR5643658	five period of Gastrodia elata	4.220
	SRR5643659	five period of Gastrodia elata	4.510
	SRR5643660	five period of Gastrodia elata	6.260
	SRR5643661	five period of Gastrodia elata	4.880
	SRR5643662	five period of Gastrodia elata	3.280
	SRR5643663	five period of Gastrodia elata	4.040
	SRR5643664	five period of Gastrodia elata	3.900
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.770
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	7.050
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.680
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	6.220
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	6.490
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	5.610
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.590
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.860
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.000
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.650
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.170
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.170
SRP279888	Gastro	Gastrodia elata tuber	7.94
	Juven	Juvenile tuber	11.16
	Mother_Gastro	Mother tuber of Gastrodia elata	6.88
	Mother_Juven	Mother tuber of Juvenile	11.76