Detail information of GWHGAAEX015265/evm.TU.scaffold_65.34


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG23150Predicted translation initiation factor related to eIF-3a
nrgi|743765136|ref|XP_010912787.1|0PREDICTED: LOW QUALITY PROTEIN: eukaryotic translation initiation factor 2A [Elaeis guineensis]
trEMBLtr|M0TB20|M0TB20_MUSAM0Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr6P28750_001}
TAIRAT1G731800Eukaryotic translation initiation factor eIF2A family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006315832061610090+
Transcript Sequence

Network for GWHGAAEX015265

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08662.10eIF2A2144089.60E-72
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006413Biological Processtranslational initiation
GO:0003743Molecular Functiontranslation initiation factor activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms38.110
SRR2545915Juvenile tuber27.160
SRP108465SRR5643513five period of Gastrodia elata21.650
SRR5643514five period of Gastrodia elata27.430
SRR5643515five period of Gastrodia elata24.890
SRR5643524five period of Gastrodia elata24.900
SRR5643525five period of Gastrodia elata21.290
SRR5643528five period of Gastrodia elata22.060
SRR5643658five period of Gastrodia elata19.790
SRR5643659five period of Gastrodia elata25.600
SRR5643660five period of Gastrodia elata27.530
SRR5643661five period of Gastrodia elata25.460
SRR5643662five period of Gastrodia elata25.220
SRR5643663five period of Gastrodia elata28.320
SRR5643664five period of Gastrodia elata29.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_125.060
SRR6049655Rhizomagastrodiae_C368-T10_good_133.160
SRR6049656Rhizomagastrodiae_C368-T07_good_123.850
SRR6049657Rhizomagastrodiae_C368-T07_good_126.700
SRR6049658Rhizomagastrodiae_C368-T04_good_128.850
SRR6049659Rhizomagastrodiae_C368-T04_good_130.400
SRR6049660Rhizomagastrodiae_C368-T01_good_127.200
SRR6049661Rhizomagastrodiae_C368-T04_good_128.040
SRR6049662Rhizomagastrodiae_C368-T01_good_127.510
SRR6049663Rhizomagastrodiae_C368-T01_good_125.760
SRR6049664Rhizomagastrodiae_C368-T10_good_128.180
SRR6049665Rhizomagastrodiae_C368-T10_good_128.180
SRP279888GastroGastrodia elata tuber 30.52
JuvenJuvenile tuber32.28
Mother_GastroMother tuber of Gastrodia elata 23.96
Mother_JuvenMother tuber of Juvenile 27.11