Detail information of GWHGAAEX015268/evm.TU.scaffold_65.39


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG28273.00E-44Uncharacterized conserved protein
nrgi|695046043|ref|XP_009410834.1|2.61E-150PREDICTED: protein SDE2 homolog [Musa acuminata subsp. malaccensis]
trEMBLtr|M0TKD7|M0TKD7_MUSAM1.00E-150Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P24510_001}
TAIRAT4G01000_23.00E-44Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006317169231742062+
Transcript Sequence

Network for GWHGAAEX015268

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13019.5Telomere_Sde241586.00E-33
PF13297.5Telomere_Sde2_23974559.30E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0005515Molecular Functionprotein binding

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms61.840
SRR2545915Juvenile tuber70.750
SRP108465SRR5643513five period of Gastrodia elata41.500
SRR5643514five period of Gastrodia elata32.630
SRR5643515five period of Gastrodia elata37.010
SRR5643524five period of Gastrodia elata38.790
SRR5643525five period of Gastrodia elata53.970
SRR5643528five period of Gastrodia elata50.580
SRR5643658five period of Gastrodia elata68.410
SRR5643659five period of Gastrodia elata33.630
SRR5643660five period of Gastrodia elata33.290
SRR5643661five period of Gastrodia elata28.690
SRR5643662five period of Gastrodia elata28.500
SRR5643663five period of Gastrodia elata29.550
SRR5643664five period of Gastrodia elata32.830
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_135.510
SRR6049655Rhizomagastrodiae_C368-T10_good_120.930
SRR6049656Rhizomagastrodiae_C368-T07_good_132.120
SRR6049657Rhizomagastrodiae_C368-T07_good_140.770
SRR6049658Rhizomagastrodiae_C368-T04_good_139.620
SRR6049659Rhizomagastrodiae_C368-T04_good_147.140
SRR6049660Rhizomagastrodiae_C368-T01_good_133.590
SRR6049661Rhizomagastrodiae_C368-T04_good_135.660
SRR6049662Rhizomagastrodiae_C368-T01_good_130.600
SRR6049663Rhizomagastrodiae_C368-T01_good_127.130
SRR6049664Rhizomagastrodiae_C368-T10_good_129.440
SRR6049665Rhizomagastrodiae_C368-T10_good_129.440
SRP279888GastroGastrodia elata tuber 46.69
JuvenJuvenile tuber72.35
Mother_GastroMother tuber of Gastrodia elata 53.11
Mother_JuvenMother tuber of Juvenile 82.97