Detail information of GWHGAAEX015270/evm.TU.scaffold_65.41


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|313672954|ref|YP_004051065.1|4.00E-09nucleotidyltransferase [Calditerrivibrio nitroreducens DSM 19672]
KOGKOG14616.00E-45Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6)
nrgi|743836032|ref|XP_010935982.1|1.29E-61PREDICTED: translation initiation factor eIF-2B subunit epsilon [Elaeis guineensis]
trEMBLtr|M0SC98|M0SC98_MUSAM6.00E-57Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P06310_001}
TAIRAT2G349706.00E-45Trimeric LpxA-like enzyme

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006317507771766252+
Transcript Sequence

Network for GWHGAAEX015270

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module4

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00132.23Hexapep67940.0001
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03240EIF2B5 RNA transport map03013

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms1.290
SRR2545915Juvenile tuber2.590
SRP108465SRR5643513five period of Gastrodia elata0.790
SRR5643514five period of Gastrodia elata0.710
SRR5643515five period of Gastrodia elata0.440
SRR5643524five period of Gastrodia elata0.520
SRR5643525five period of Gastrodia elata1.140
SRR5643528five period of Gastrodia elata1.280
SRR5643658five period of Gastrodia elata1.330
SRR5643659five period of Gastrodia elata0.900
SRR5643660five period of Gastrodia elata0.980
SRR5643661five period of Gastrodia elata1.000
SRR5643662five period of Gastrodia elata0.850
SRR5643663five period of Gastrodia elata2.580
SRR5643664five period of Gastrodia elata0.390
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_10.600
SRR6049655Rhizomagastrodiae_C368-T10_good_11.210
SRR6049656Rhizomagastrodiae_C368-T07_good_10.380
SRR6049657Rhizomagastrodiae_C368-T07_good_10.110
SRR6049658Rhizomagastrodiae_C368-T04_good_10.000
SRR6049659Rhizomagastrodiae_C368-T04_good_10.340
SRR6049660Rhizomagastrodiae_C368-T01_good_10.500
SRR6049661Rhizomagastrodiae_C368-T04_good_10.000
SRR6049662Rhizomagastrodiae_C368-T01_good_10.930
SRR6049663Rhizomagastrodiae_C368-T01_good_10.110
SRR6049664Rhizomagastrodiae_C368-T10_good_10.500
SRR6049665Rhizomagastrodiae_C368-T10_good_10.500
SRP279888GastroGastrodia elata tuber 1.35
JuvenJuvenile tuber1.69
Mother_GastroMother tuber of Gastrodia elata 2.41
Mother_JuvenMother tuber of Juvenile 2.12