Gene detail

Detail information of GWHGAAEX015279/evm.TU.scaffold_65.51

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672171385\|ref\|XP_008805762.1\|	2.48E-179	PREDICTED: uncharacterized protein LOC103718627 [Phoenix dactylifera]
trEMBL	tr\|M0SHB2\|M0SHB2_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr3P23960_001}
TAIR	AT5G27650	2.00E-145	Tudor/PWWP/MBT superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000063	2192350	2214534	+

Transcript Sequence
>GWHTAAEX015279 GCTGCATGCTCTAAAATTGCGCCCCAATGTGCTTTTTACGCCGCAGCCATTGCCCGTCCCTCTTCGTTTTGCTCAGTTTCTAGGGTTTTAGTCTTCTTGCTCGAGTTGTTCGATTTCCAGGTTTTTGCAATCAGTAGGCAGCTATTTTTTTTCATGTTACGCGATCCAGGTCGCCAAATTTGATACTGCAATTTGTTAAGAGTTTCTCGTTCGTTTTCACTATTATGATTTCTCTCTTGAAAGGATTCGAGATAGAGGGGAAATCCACCCTTTCCGGCGTCGATACCGCCACCTCAATACCTGATTGTTCTTTCTCTATGATGGAGAATACGCAGGAAAGAGGTAGGATTTCGTCTCGGACCGATTTAGCAGAAAAAGTGTCAGATCTGGAAACTAGGGTTCCTGGGATAGGCGATCGGAGAGGTTCTGGATCTCTGGGGGAGGAGCCGAAGATGGCCGCCGATGATGGCGGCGAGTCTATCACGTATATGGATGAAGAGAGTAGGGGTTCCTCACTGGATTCAATTGTCTGGATGCATGGTCTTAGAGTAGGTGACATGGTTTGGGGTAAGGTGAAGTCCCACCCATGGTGGCCTGGCCACATATTCAATGTAGCCTTTGCCTCGCTTTCTGTGCGAAGGATGAGACGGGAAGGACATGTCTTGGTTGCTTTCTTTGGTGACAGCAGCTACGGATGGTTTGATCCAGCAGAGCTCATTCCGTTTGAGCCTCATTTTCCTGAAAAGTCAAGGCAAACAACCTCAAGGAACTTTGTCAGGGCCGTTGATGAGGCAGTGGATGAGGCTAGTCGGAGAGCTTCTCTTGCCTTTGCTTGCTTCTGTCGCAATCTTCACAATTTCCGGCCAACTAATGTTCCCAGCTACTTTGCTGTTGATGTTGTGGGATATGAACCAGGCGGTATCTACTCTTCAAGACAAATAAAGAGGTCTAGGGATAGCCTAGTTCCTGTTGAGCTGGTCTCCTTTATTCAGCAGTTGGCATTAGCTCCTTTCGGAAATGAAGGCAACCAAATTGAGTGGTTTCAAGCAGTAGCGAAGTTGCTGGCATACCGGAGGGCAGTTTTTGAGGAGTTTGATGAGACTTATGCTCAGGCATTTGGTGTGGACCCTGTGCGCCCTTCTCCCAACAGTGTGGCTGCTTGTGATCAGACTGATAGATTTGCGCCTCGAGTGGTTCCGCTCACAGGGGCGCTGGTAGTTGCGGAGGCATTGGGCGAGCGGAGGAGCTCGGCGAGGCAAGCGGCTCTCCAAAAACCCATAAATATTTCCAAGAAGAACAAGTACGTCCTGAAAAGGCGGGACGATCTCCCCTCCGCCGTCTCCGCCTCCGCTTCTGCCTCCGCAGGCAGCTCTCTCCCGGATTTACCTTCCGCATCTCAACCCCTCCATCATGCCTTCTTTCCCGCATCGCCAGATTCCGCCATGGATTCCGACTACGAGCTTCGAAAGAGGGAGAGCATTCTGCTTCCACCGCCTGCTGAGATCCCTAATCATCCATCTGCGCCCATGGAGGATTCCCTACCAGCGGACCATTCTCAGACATCAGATCCGGCTGAAATTAAAAACGAGCCGAAATCATCCGATTCCATCGTGGCCGCTCCTACACAGATCGCTCAAAATTACGCTGAGCACGACGAGTGCAAGAGGCCCTCTGTCGATGCAGTGCTTGTTGCCAGGGAGAAGATACCAAAGCGCGCCCGAGAGGACCTGAGCGAGGTATCTGGCGATGCCAAGGGGAAAAAGAAGAAGAAGAAGGACGGCCTCGGCGCGGATCAACATCCGCCTTCCTTTGATCCGGATCAGAAACAGCTGCGCAGGTCGCAAGCAGGCAGCAGCAATCCGGAGCTTCTTTCCCAGGAAGATGAAATTAGCATGGAACTCCCTCCCCGGCTGGAGTTAAGTTCATTGCAACTCCCCCTTCTCATCAACGACCTCACATCCATTGCACTCGACCCGTTCTTCGCCATCGAACGCCACGCCCCCGCCATTGTTCGTCACGTCTTCCTCCGATTTCGCTCGCGGGTGTATCAGAAGAGCCTTAGCTTCCCCGTTATGGCCGAAACCCCGGCAGACGTTTCGTCCTCGGCAGGCAGAGACGGGAGGGAGCACAGGGAGTCTTCTTCCAAGCACCCAAAACTAGCATCCAGAAAGGGAGGGGATTCGATTAAACCTGCCCGTAAACGTGATCCGTCTGACCGCCAGGAAGAGCTGTCGGCGAAGAAGATGAAGAAGATCCACGAGCTGAAACAACTCACGAGCAAGAAGAAGCCCGCCGTCAGCCAACAGCAGCAGCAGCCAAAGGATCAAAAGGACAGCACGGCAGAAGCAGCAGCAGCAGCAGCATTAGCCAAGAAGCAGGAGCCGGCTCCGCCTCCAAAGGCACCAAGCCCTACCTATCTTGTGATGAAATTCCCGCCGAGGTCGACGCTGCCTTCTGTGTCAAACCTGAACGCCAGATTCGTTCGATTCGGGCCGCTCGATCTCTCAGGCACTCGCGTGTTTTGGAAAACCTATACCTGCAAGGTTCTATTCAAGCACAAGCCCAACGCGCAGGCAGCCTACAACTTCGTCCAGAACAACGACCTCTTCGGCCAGGTCAAAGTCGCTTACCATCTCCGTGAGGTCGAGATTTCCGTCCCCGACCAACAACAACAGACTCTCGATCCTCCTCCTTCGATGAAGCCGCCCTCGGATTCCTCCCGTCTTCAAAAACCTTCCTCTTTGGTTTCTCGATCCCGGCAGAGCCACACACAGCTAAAATCCATCCTGAAAAAATCCGGCGGCGACGAGCCTAGCAATAATAATGGCGCGGCCTCATCTGGAAGGGAGATTCCGAGGGTGAAATTCTTGCTCAACGGAGACGATGATGTTGGCGAGCTGCCTTCATCAAAGGCAGCCATCAATGGCAGCGGGCTCCTCCCTTACCGCAACGTCCCTTCAAATCTTCCGCAAAGGCTCCCGCAGCCCTCGAGATTAGGGTTTCCGCCACCGGTCGAGCAGAGGGATATCTCCGGCCCGATGCTGAGCCTCCTCCTTAAATGCAACGATATTGTTAGCCATCTGAAGGCCTCTATCGGCTACCTTCCCTACCATACCCTGTGATGCGGGATTTAGAGGAAGGCTGTGTTCTCTCTCAAAGGGGAAAAAAGAATGCGCAGAAAGAAAATGGAATCGCGGAGGTCTCTCTGCAATGGTTCGATTTGCTTCGTCTCTTCTTTCCTTCAATTATTTGCCCGCCTCCTCCCCCCTTCCGCCCTTTTTTTCATTAGATGCAATGCAATGAAGCTGTTTGTTGTCTTGTTCTTGGGCTGAATGATCAAACCGGGTCTTCTAACTTTCTTTTTTTCGTCAGCCGTAGTTTATATTATATTATATCGCTGTAACTTTATCGTTTTAGAAAATCTAGTTATTTATGGCACTAATTTGGTGATCATCCAACCAGAAATGTTTCCAAGGCAAAAAAAAAAAGGTAATAATTGTAAAGGTAGGGTATGAATTTAAATGGATGCTAGCTTTATTAAACACTACTCAAAACTTGGGCCATCTCTTGGAGTAGAAGGGGATTCATACCGATCAAGCAAGC

Network for GWHGAAEX015279

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module6

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00855.16	PWWP	108	193	2.80E-17

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K17398	DNMT3A	Metabolic pathways	map01100
K17398	DNMT3A	Cysteine and methionine metabolism	map00270

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	57.050
SRP064423	SRR2545915	Juvenile tuber	34.670
SRP108465	SRR5643513	five period of Gastrodia elata	24.850
	SRR5643514	five period of Gastrodia elata	20.530
	SRR5643515	five period of Gastrodia elata	16.860
	SRR5643524	five period of Gastrodia elata	19.330
	SRR5643525	five period of Gastrodia elata	19.710
	SRR5643528	five period of Gastrodia elata	20.220
	SRR5643658	five period of Gastrodia elata	23.960
	SRR5643659	five period of Gastrodia elata	28.790
	SRR5643660	five period of Gastrodia elata	40.760
	SRR5643661	five period of Gastrodia elata	28.090
	SRR5643662	five period of Gastrodia elata	30.330
	SRR5643663	five period of Gastrodia elata	35.490
	SRR5643664	five period of Gastrodia elata	40.680
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	50.370
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	55.130
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	40.600
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	81.270
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	82.830
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	111.220
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	50.890
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	60.470
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	27.910
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	28.330
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	22.450
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	22.450
SRP279888	Gastro	Gastrodia elata tuber	26.33
	Juven	Juvenile tuber	57.91
	Mother_Gastro	Mother tuber of Gastrodia elata	23.88
	Mother_Juven	Mother tuber of Juvenile	34.95