Detail information of GWHGAAEX015280/evm.TU.scaffold_65.53


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428210244|ref|YP_007094597.1|3.00E-08Carboxymethylenebutenolidase [Chroococcidiopsis thermalis PCC 7203]
KOGKOG30434.00E-96Predicted hydrolase related to dienelactone hydrolase
nrgi|672165489|ref|XP_008802649.1|1.44E-118PREDICTED: endo-1,3;1,4-beta-D-glucanase-like isoform X1 [Phoenix dactylifera]
Swissprottr|Q9ZT66|E134_MAIZE3.00E-43Endo-1,3;1,4-beta-D-glucanase (Precursor)
trEMBLtr|B3TLR0|B3TLR0_ELAGV5.00E-115Endo-1,3;1,4-beta-D-glucanase {ECO:0000313|EMBL:ACF06491.1}
TAIRAT3G236004.00E-96alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006322319422263789+
Transcript Sequence

Network for GWHGAAEX015280

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01738.17DLH302312.80E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms16.130
SRR2545915Juvenile tuber17.000
SRP108465SRR5643513five period of Gastrodia elata25.490
SRR5643514five period of Gastrodia elata26.970
SRR5643515five period of Gastrodia elata25.440
SRR5643524five period of Gastrodia elata26.950
SRR5643525five period of Gastrodia elata14.620
SRR5643528five period of Gastrodia elata11.200
SRR5643658five period of Gastrodia elata14.180
SRR5643659five period of Gastrodia elata13.100
SRR5643660five period of Gastrodia elata12.350
SRR5643661five period of Gastrodia elata10.350
SRR5643662five period of Gastrodia elata10.930
SRR5643663five period of Gastrodia elata8.090
SRR5643664five period of Gastrodia elata11.470
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_130.780
SRR6049655Rhizomagastrodiae_C368-T10_good_113.690
SRR6049656Rhizomagastrodiae_C368-T07_good_140.650
SRR6049657Rhizomagastrodiae_C368-T07_good_126.770
SRR6049658Rhizomagastrodiae_C368-T04_good_134.730
SRR6049659Rhizomagastrodiae_C368-T04_good_134.030
SRR6049660Rhizomagastrodiae_C368-T01_good_129.870
SRR6049661Rhizomagastrodiae_C368-T04_good_130.420
SRR6049662Rhizomagastrodiae_C368-T01_good_137.610
SRR6049663Rhizomagastrodiae_C368-T01_good_140.840
SRR6049664Rhizomagastrodiae_C368-T10_good_156.080
SRR6049665Rhizomagastrodiae_C368-T10_good_156.080
SRP279888GastroGastrodia elata tuber 11.13
JuvenJuvenile tuber43.67
Mother_GastroMother tuber of Gastrodia elata 28.20
Mother_JuvenMother tuber of Juvenile 38.60