Detail information of GWHGAAEX015281/evm.TU.scaffold_65.56


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428210244|ref|YP_007094597.1|5.00E-07Carboxymethylenebutenolidase [Chroococcidiopsis thermalis PCC 7203]
KOGKOG30437.00E-96Predicted hydrolase related to dienelactone hydrolase
nrgi|743882885|ref|XP_010909270.1|3.48E-120PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Elaeis guineensis]
Swissprottr|Q9ZT66|E134_MAIZE6.00E-42Endo-1,3;1,4-beta-D-glucanase (Precursor)
trEMBLtr|B3TLR0|B3TLR0_ELAGV4.00E-116Endo-1,3;1,4-beta-D-glucanase {ECO:0000313|EMBL:ACF06491.1}
TAIRAT3G236007.00E-96alpha/beta-Hydrolases superfamily protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006323597702380456+
Transcript Sequence

Network for GWHGAAEX015281

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01738.17DLH302321.90E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0016787Molecular Functionhydrolase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms96.420
SRR2545915Juvenile tuber122.020
SRP108465SRR5643513five period of Gastrodia elata126.890
SRR5643514five period of Gastrodia elata142.680
SRR5643515five period of Gastrodia elata124.430
SRR5643524five period of Gastrodia elata144.410
SRR5643525five period of Gastrodia elata45.920
SRR5643528five period of Gastrodia elata46.350
SRR5643658five period of Gastrodia elata54.380
SRR5643659five period of Gastrodia elata62.080
SRR5643660five period of Gastrodia elata59.070
SRR5643661five period of Gastrodia elata58.160
SRR5643662five period of Gastrodia elata40.140
SRR5643663five period of Gastrodia elata53.930
SRR5643664five period of Gastrodia elata44.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_198.330
SRR6049655Rhizomagastrodiae_C368-T10_good_188.960
SRR6049656Rhizomagastrodiae_C368-T07_good_1105.080
SRR6049657Rhizomagastrodiae_C368-T07_good_194.030
SRR6049658Rhizomagastrodiae_C368-T04_good_194.580
SRR6049659Rhizomagastrodiae_C368-T04_good_191.590
SRR6049660Rhizomagastrodiae_C368-T01_good_186.430
SRR6049661Rhizomagastrodiae_C368-T04_good_191.830
SRR6049662Rhizomagastrodiae_C368-T01_good_1127.640
SRR6049663Rhizomagastrodiae_C368-T01_good_194.240
SRR6049664Rhizomagastrodiae_C368-T10_good_1121.150
SRR6049665Rhizomagastrodiae_C368-T10_good_1121.150
SRP279888GastroGastrodia elata tuber 59.15
JuvenJuvenile tuber67.14
Mother_GastroMother tuber of Gastrodia elata 59.65
Mother_JuvenMother tuber of Juvenile 104.30