Detail information of GWHGAAEX015296/evm.TU.scaffold_65.82


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|392374492|ref|YP_003206325.1|1.00E-17acyl carrier protein (ACP) [Candidatus Methylomirabilis oxyfera]
KOGKOG17488.00E-32Acyl carrier protein/NADH-ubiquinone oxidoreductase, NDUFAB1/SDAP subunit
nrgi|695059199|ref|XP_009417948.1|2.75E-32PREDICTED: acyl carrier protein 2, mitochondrial-like [Musa acuminata subsp. malaccensis]
Swissprottr|O80800|ACPM2_ARATH2.00E-32Acyl carrier protein 2, mitochondrial (Precursor)
trEMBLtr|M0U189|M0U189_MUSAM1.00E-32Acyl carrier protein {ECO:0000256|RuleBase:RU000722}
TAIRAT1G652908.00E-32mitochondrial acyl carrier protein 2

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006330653093084133+
Transcript Sequence

Network for GWHGAAEX015296

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00550.24PP-binding18773.70E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03955NDUFAB1 Metabolic pathways map01100
Oxidative phosphorylationmap00190
Retrograde endocannabinoid signalingmap04723
Thermogenesismap04714

Gene Ontology

GO term OntologyName
GO:0006633Biological Processfatty acid biosynthetic process

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms30.940
SRR2545915Juvenile tuber35.480
SRP108465SRR5643513five period of Gastrodia elata10.680
SRR5643514five period of Gastrodia elata9.030
SRR5643515five period of Gastrodia elata6.700
SRR5643524five period of Gastrodia elata7.450
SRR5643525five period of Gastrodia elata3.590
SRR5643528five period of Gastrodia elata5.310
SRR5643658five period of Gastrodia elata2.900
SRR5643659five period of Gastrodia elata9.030
SRR5643660five period of Gastrodia elata11.050
SRR5643661five period of Gastrodia elata11.120
SRR5643662five period of Gastrodia elata12.880
SRR5643663five period of Gastrodia elata10.970
SRR5643664five period of Gastrodia elata14.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_117.820
SRR6049655Rhizomagastrodiae_C368-T10_good_167.700
SRR6049656Rhizomagastrodiae_C368-T07_good_119.210
SRR6049657Rhizomagastrodiae_C368-T07_good_112.960
SRR6049658Rhizomagastrodiae_C368-T04_good_126.770
SRR6049659Rhizomagastrodiae_C368-T04_good_125.680
SRR6049660Rhizomagastrodiae_C368-T01_good_117.860
SRR6049661Rhizomagastrodiae_C368-T04_good_127.510
SRR6049662Rhizomagastrodiae_C368-T01_good_123.570
SRR6049663Rhizomagastrodiae_C368-T01_good_123.130
SRR6049664Rhizomagastrodiae_C368-T10_good_130.340
SRR6049665Rhizomagastrodiae_C368-T10_good_130.340
SRP279888GastroGastrodia elata tuber 9.26
JuvenJuvenile tuber2.08
Mother_GastroMother tuber of Gastrodia elata 19.66
Mother_JuvenMother tuber of Juvenile 2.42