Gene detail

Detail information of GWHGAAEX015303/evm.TU.scaffold_65.90

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1311	5.00E-100	DHHC-type Zn-finger proteins
nr	gi\|695074300\|ref\|XP_009384346.1\|	1.65E-112	PREDICTED: probable protein S-acyltransferase 4 [Musa acuminata subsp. malaccensis]
Swissprot	tr\|Q9M1K5\|ZDH13_ARATH	1.00E-100	Probable protein S-acyltransferase 4
trEMBL	tr\|M0RTS5\|M0RTS5_MUSAM	2.00E-108	S-acyltransferase {ECO:0000256\|RuleBase:RU079119}
TAIR	AT3G56930	5.00E-100	DHHC-type zinc finger family protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000063	3456313	3458355	-

Transcript Sequence
>GWHTAAEX015303 ATGAACACTCCTTCCATGGAATGGATCATTGGAAGAACCCCACAAAAGAAAGTTCCTCGAACAAAAGATGTTATTGTAAATGGATTTGCAATCAAGATAAAATACTGCGAAACATGTTTGCTATATCGCCCACCCCGCACTTCTCATTGTTCAATTTGCAACAATTGTGTTCAAAAATTTGATCATCATTGCCCATGGGTTGGACAGTGCATTGGATTGAGAAACTATCGGTTCTTCTTCTTGTTTGTATCAACTTCAGCTTTCTTGTGCATATATGTCTTTACTCTCTCGGTTTTGAATATACTTCAAGAGAGGAAAAATTATCATACTTTTGTAAAGCTCATCGTTGGGGAGATCATTTCTGTGATATTAATGATATATGCTTTTTTGTCTGTATGGTTTGTCGGCGGGCTGAGTATTTTCCATCTATATTTGATCTGCACAAATCAGACAACCTATGAGAATTTTCGATTCCACTATGATGAGAATGACAACCCATTTAACAAGGGTGTTTGGAACAACATTAAGGAGGTATTCTTCTCAAGTATTCCCCCTTCAATGAACAGTTTCCGGGCAAGAATACTTGATAAAGGAGCAGAAAATGAACTTTATACTTCATCTTTGGGCATAGATATCGTTAGCTCGTTTGAGAAGGTTGGAATTGAAATGGCCAGTACAGTTGCAGTGAACAAAAATGAGCCTATTTGTGCTAGTTTACAAAACATAGATTATAGATTTAATGTTGAAAAGCAAGGAGCCATTAATAAACTTAAGGGTGAGTCTATTGGTCAGTCAGATTTAAGTAATGCTCTAGAACATGACCAAATATCAATGGAATATAAAAGTTGCATAGGTGATTATGGATCCTTTGTGGAGTGTCAGGATCAGATGACCAAAGGTGAAACTTTAATGTATAGTATGCCCAATGAAGATTGACATCAGCAACCAACATAAGGTAACTATACTATTATGTTTGTCTGAAATCATATAAATATTAAATTTTAAGCGTTTATGGTGCCATAGTTAGAAAGGCATTTGAACAAGATGGTAGTAGATCAACATATTAGAGTTAAATTAAAAATTGGCATGCTTTTTGTGGGGCAATTTGTTACATCTCAAAAACCATATTTACACATCTAACACTCAGCTAAATCATCCTTGCACTCATAAAATATCTAATCGCTATAATTGTTAGATATTCCTTGCATGTCTAAAATTGTATAATAGTTTTATGATTATAGAAAATTTGAGTGTTACAGAAAATAGCAGAGGTTGTCATGCTTTGCATGAGATCTCCATTTTATTTTTTTATTTTTTTCTTGATTAACAGTTAATGTAATTCTCCATTTTCTTATTTAGAAGTAAGATCATCTTAGTTGCATCAACTCAATCCACCCTGATAGGATCACAGAAAGAGGCCAATGCCCAAACAATGTGATGTATAACTTCAACCTTGTCTTAATAAATGTCATATTCATTAACTGTTAGCCAGAAACACAAAGACTTGGACATTTCCTTTTAAAACCTAATCCAGATTGAGTACAGTATATATGTCTTATTCTTCACCAATTTTTTTTCGATTCAATTTCACTATTTTTTTTCTTACTATTTTCAACCATACATTCTCATTTAGATACCTAAACTTCAAATATTCAAAATTTATAGTAGATGCTAAATTATGAGTATATAAG

Network for GWHGAAEX015303

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module4

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF01529.19	DHHC	33	156	1.10E-37

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K16675	ZDHHC9_14_18	Hippo signaling pathway - fly	map04391

Gene Ontology

GO term	Ontology	Name
GO:0016409	Molecular Function	palmitoyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	4.520
SRP064423	SRR2545915	Juvenile tuber	4.830
SRP108465	SRR5643513	five period of Gastrodia elata	4.240
	SRR5643514	five period of Gastrodia elata	5.480
	SRR5643515	five period of Gastrodia elata	4.800
	SRR5643524	five period of Gastrodia elata	4.150
	SRR5643525	five period of Gastrodia elata	5.560
	SRR5643528	five period of Gastrodia elata	6.010
	SRR5643658	five period of Gastrodia elata	8.400
	SRR5643659	five period of Gastrodia elata	3.240
	SRR5643660	five period of Gastrodia elata	2.340
	SRR5643661	five period of Gastrodia elata	2.600
	SRR5643662	five period of Gastrodia elata	2.880
	SRR5643663	five period of Gastrodia elata	3.120
	SRR5643664	five period of Gastrodia elata	2.130
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.040
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	3.760
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	6.780
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	4.010
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	7.480
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	6.290
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	4.360
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.330
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	5.910
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.730
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.390
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.390
SRP279888	Gastro	Gastrodia elata tuber	3.14
	Juven	Juvenile tuber	2.49
	Mother_Gastro	Mother tuber of Gastrodia elata	14.01
	Mother_Juven	Mother tuber of Juvenile	9.61