Detail information of GWHGAAEX015310/evm.TU.scaffold_65.95


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG32373.00E-98Uncharacterized conserved protein
nrgi|743786141|ref|XP_010922096.1|2.24E-122PREDICTED: probable U3 small nucleolar RNA-associated protein 11 [Elaeis guineensis]
Swissprottr|Q8S1Z1|UTP11_ORYSJ6.00E-112Probable U3 small nucleolar RNA-associated protein 11
trEMBLtr|M5VL75|M5VL75_PRUPE3.00E-117Uncharacterized protein {ECO:0000313|EMBL:EMJ01611.1}
TAIRAT3G603603.00E-98embryo sac development arrest 14

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006335312763538264+
Transcript Sequence

Network for GWHGAAEX015310

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03998.12Utp11102273.40E-61
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006364Biological ProcessrRNA processing
GO:0032040Cellular Componentsmall-subunit processome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms111.000
SRR2545915Juvenile tuber92.290
SRP108465SRR5643513five period of Gastrodia elata57.190
SRR5643514five period of Gastrodia elata46.260
SRR5643515five period of Gastrodia elata47.380
SRR5643524five period of Gastrodia elata47.220
SRR5643525five period of Gastrodia elata49.140
SRR5643528five period of Gastrodia elata59.970
SRR5643658five period of Gastrodia elata54.230
SRR5643659five period of Gastrodia elata58.900
SRR5643660five period of Gastrodia elata74.020
SRR5643661five period of Gastrodia elata54.590
SRR5643662five period of Gastrodia elata72.060
SRR5643663five period of Gastrodia elata64.640
SRR5643664five period of Gastrodia elata83.990
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_148.440
SRR6049655Rhizomagastrodiae_C368-T10_good_169.630
SRR6049656Rhizomagastrodiae_C368-T07_good_143.160
SRR6049657Rhizomagastrodiae_C368-T07_good_154.600
SRR6049658Rhizomagastrodiae_C368-T04_good_125.980
SRR6049659Rhizomagastrodiae_C368-T04_good_124.450
SRR6049660Rhizomagastrodiae_C368-T01_good_135.450
SRR6049661Rhizomagastrodiae_C368-T04_good_121.490
SRR6049662Rhizomagastrodiae_C368-T01_good_142.370
SRR6049663Rhizomagastrodiae_C368-T01_good_130.920
SRR6049664Rhizomagastrodiae_C368-T10_good_147.370
SRR6049665Rhizomagastrodiae_C368-T10_good_147.370
SRP279888GastroGastrodia elata tuber 88.24
JuvenJuvenile tuber86.77
Mother_GastroMother tuber of Gastrodia elata 54.01
Mother_JuvenMother tuber of Juvenile 68.11