Detail information of GWHGAAEX015312/evm.TU.scaffold_65.98
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|218781433|ref|YP_002432751.1| | 9.00E-34 | serine/threonine protein kinase [Desulfatibacillum alkenivorans AK-01] |
| KOG | KOG0583 | 0 | Serine/threonine protein kinase |
| nr | gi|672126696|ref|XP_008786806.1| | 0 | PREDICTED: CBL-interacting protein kinase 32-like isoform X3 [Phoenix dactylifera] |
| Swissprot | tr|Q2QY53|CIPKW_ORYSJ | 0 | CBL-interacting protein kinase 32 |
| trEMBL | tr|C4P7W7|C4P7W7_VITVI | 0 | CBL-interacting protein kinase 18 {ECO:0000313|EMBL:ACQ83534.1} |
| TAIR | AT2G26980 | 0 | CBL-interacting protein kinase 3 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000063 | 3547816 | 3598393 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015312
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 13 | 268 | 5.00E-73 |
| PF03822.13 | NAF | 308 | 367 | 9.20E-21 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | CAMK_CAMKL-CHK1 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0007165 | Biological Process | signal transduction |
| GO:0004672 | Molecular Function | protein kinase activity |
| GO:0005524 | Molecular Function | ATP binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 69.990 |
| SRR2545915 | Juvenile tuber | 62.380 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 30.240 |
| SRR5643514 | five period of Gastrodia elata | 22.980 | |
| SRR5643515 | five period of Gastrodia elata | 31.420 | |
| SRR5643524 | five period of Gastrodia elata | 20.610 | |
| SRR5643525 | five period of Gastrodia elata | 66.630 | |
| SRR5643528 | five period of Gastrodia elata | 89.960 | |
| SRR5643658 | five period of Gastrodia elata | 123.550 | |
| SRR5643659 | five period of Gastrodia elata | 45.600 | |
| SRR5643660 | five period of Gastrodia elata | 57.620 | |
| SRR5643661 | five period of Gastrodia elata | 43.150 | |
| SRR5643662 | five period of Gastrodia elata | 55.360 | |
| SRR5643663 | five period of Gastrodia elata | 53.800 | |
| SRR5643664 | five period of Gastrodia elata | 68.830 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 47.820 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 29.790 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 37.090 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 57.910 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 54.620 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 57.290 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 51.640 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 55.970 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 23.690 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 27.310 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 22.850 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 22.850 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 55.53 |
| Juven | Juvenile tuber | 45.02 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 32.46 | |
| Mother_Juven | Mother tuber of Juvenile | 30.64 |