Detail information of GWHGAAEX015318/evm.TU.scaffold_65.105


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|16330433|ref|NP_441161.1|9.00E-63peptidyl-prolyl cis-trans isomerase [Synechocystis sp. PCC 6803]
KOGKOG08793.00E-118U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase
nrgi|720098526|ref|XP_010247654.1|1.49E-125PREDICTED: peptidyl-prolyl cis-trans isomerase CYP22 [Nelumbo nucifera]
Swissprottr|Q9ZVJ4|CYP22_ARATH8.00E-119Peptidyl-prolyl cis-trans isomerase CYP22
trEMBLtr|A5BKK3|A5BKK3_VITVI2.00E-124Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}
TAIRAT2G387303.00E-118Cyclophilin-like peptidyl-prolyl cis-trans isomerase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006337881403814251-
Transcript Sequence

Network for GWHGAAEX015318

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00160.20Pro_isomerase412025.30E-45
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K09567PPIH, CYPH Spliceosome map03040

Gene Ontology

GO term OntologyName
GO:0000413Biological Processprotein peptidyl-prolyl isomerization
GO:0006457Biological Processprotein folding
GO:0003755Molecular Functionpeptidyl-prolyl cis-trans isomerase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms21.780
SRR2545915Juvenile tuber37.240
SRP108465SRR5643513five period of Gastrodia elata55.590
SRR5643514five period of Gastrodia elata63.460
SRR5643515five period of Gastrodia elata53.180
SRR5643524five period of Gastrodia elata59.800
SRR5643525five period of Gastrodia elata64.790
SRR5643528five period of Gastrodia elata62.110
SRR5643658five period of Gastrodia elata67.890
SRR5643659five period of Gastrodia elata40.440
SRR5643660five period of Gastrodia elata37.790
SRR5643661five period of Gastrodia elata48.200
SRR5643662five period of Gastrodia elata40.060
SRR5643663five period of Gastrodia elata40.360
SRR5643664five period of Gastrodia elata39.620
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_132.350
SRR6049655Rhizomagastrodiae_C368-T10_good_154.620
SRR6049656Rhizomagastrodiae_C368-T07_good_141.200
SRR6049657Rhizomagastrodiae_C368-T07_good_127.920
SRR6049658Rhizomagastrodiae_C368-T04_good_124.550
SRR6049659Rhizomagastrodiae_C368-T04_good_123.120
SRR6049660Rhizomagastrodiae_C368-T01_good_127.310
SRR6049661Rhizomagastrodiae_C368-T04_good_124.900
SRR6049662Rhizomagastrodiae_C368-T01_good_141.200
SRR6049663Rhizomagastrodiae_C368-T01_good_133.410
SRR6049664Rhizomagastrodiae_C368-T10_good_160.720
SRR6049665Rhizomagastrodiae_C368-T10_good_160.720
SRP279888GastroGastrodia elata tuber 41.93
JuvenJuvenile tuber46.19
Mother_GastroMother tuber of Gastrodia elata 36.48
Mother_JuvenMother tuber of Juvenile 31.53