Detail information of GWHGAAEX015333/evm.TU.scaffold_65.134


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|556566150|ref|YP_008734575.1|2.00E-06NLP/P60 protein [Actinoplanes friuliensis DSM 7358]
nrgi|404654|gb|AAA16280.1|7.36E-26mannose-specific lectin, partial [Allium ursinum]
Swissprottr|P83886|ASAL_ALLSA6.00E-26Mannose-specific lectin (Precursor)
trEMBLtr|Q38725|Q38725_ALLUR3.00E-26Mannose-specific lectin {ECO:0000313|EMBL:AAA16280.1} (Precursor; Fragment)

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006344862114486833+
Transcript Sequence

Network for GWHGAAEX015333

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01453.23B_lectin431081.20E-10
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata1285.520
SRR5643514five period of Gastrodia elata112.200
SRR5643515five period of Gastrodia elata321.700
SRR5643524five period of Gastrodia elata70.280
SRR5643525five period of Gastrodia elata0.000
SRR5643528five period of Gastrodia elata0.360
SRR5643658five period of Gastrodia elata0.000
SRR5643659five period of Gastrodia elata0.570
SRR5643660five period of Gastrodia elata0.470
SRR5643661five period of Gastrodia elata0.630
SRR5643662five period of Gastrodia elata0.160
SRR5643663five period of Gastrodia elata0.120
SRR5643664five period of Gastrodia elata0.140
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_11259.750
SRR6049655Rhizomagastrodiae_C368-T10_good_13288.150
SRR6049656Rhizomagastrodiae_C368-T07_good_12165.570
SRR6049657Rhizomagastrodiae_C368-T07_good_1584.760
SRR6049658Rhizomagastrodiae_C368-T04_good_1594.640
SRR6049659Rhizomagastrodiae_C368-T04_good_1697.470
SRR6049660Rhizomagastrodiae_C368-T01_good_1174.720
SRR6049661Rhizomagastrodiae_C368-T04_good_1312.630
SRR6049662Rhizomagastrodiae_C368-T01_good_1298.770
SRR6049663Rhizomagastrodiae_C368-T01_good_1330.550
SRR6049664Rhizomagastrodiae_C368-T10_good_14104.890
SRR6049665Rhizomagastrodiae_C368-T10_good_14104.890
SRP279888GastroGastrodia elata tuber 0.05
JuvenJuvenile tuber17.67
Mother_GastroMother tuber of Gastrodia elata 1.03
Mother_JuvenMother tuber of Juvenile 0.47