Detail information of GWHGAAEX015334/evm.TU.scaffold_65.135


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|590653373|ref|XP_007033404.1|1.30E-163Trichome birefringence-like 19 [Theobroma cacao]
Swissprottr|Q9LFT0|TBL19_ARATH6.00E-140Protein trichome birefringence-like 19
trEMBLtr|M0TJ44|M0TJ44_MUSAM3.00E-164Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P20070_001}
trEMBLtr|M0TJ44|M0TJ44_MUSAM7.00E-132Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr7P20070_001}
TAIRAT5G159002.00E-139TRICHOME BIREFRINGENCE-LIKE 19

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006345935484605409+
Transcript Sequence

Network for GWHGAAEX015334

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF14416.5PMR5N861387.10E-21
PF13839.5PC-Esterase1394184.10E-81
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms36.800
SRR2545915Juvenile tuber40.950
SRP108465SRR5643513five period of Gastrodia elata52.200
SRR5643514five period of Gastrodia elata67.100
SRR5643515five period of Gastrodia elata45.670
SRR5643524five period of Gastrodia elata61.740
SRR5643525five period of Gastrodia elata69.730
SRR5643528five period of Gastrodia elata45.130
SRR5643658five period of Gastrodia elata58.580
SRR5643659five period of Gastrodia elata57.350
SRR5643660five period of Gastrodia elata46.700
SRR5643661five period of Gastrodia elata48.040
SRR5643662five period of Gastrodia elata53.270
SRR5643663five period of Gastrodia elata62.660
SRR5643664five period of Gastrodia elata54.260
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_138.560
SRR6049655Rhizomagastrodiae_C368-T10_good_139.180
SRR6049656Rhizomagastrodiae_C368-T07_good_143.180
SRR6049657Rhizomagastrodiae_C368-T07_good_142.360
SRR6049658Rhizomagastrodiae_C368-T04_good_131.540
SRR6049659Rhizomagastrodiae_C368-T04_good_125.060
SRR6049660Rhizomagastrodiae_C368-T01_good_136.090
SRR6049661Rhizomagastrodiae_C368-T04_good_131.280
SRR6049662Rhizomagastrodiae_C368-T01_good_142.470
SRR6049663Rhizomagastrodiae_C368-T01_good_140.410
SRR6049664Rhizomagastrodiae_C368-T10_good_137.780
SRR6049665Rhizomagastrodiae_C368-T10_good_137.780
SRP279888GastroGastrodia elata tuber 38.99
JuvenJuvenile tuber43.22
Mother_GastroMother tuber of Gastrodia elata 40.66
Mother_JuvenMother tuber of Juvenile 34.98