Detail information of GWHGAAEX015339/evm.TU.scaffold_65.141
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|262199486|ref|YP_003270695.1| | 1.00E-22 | serine/threonine protein kinase [Haliangium ochraceum DSM 14365] |
| KOG | KOG1187 | 9.00E-61 | Serine/threonine protein kinase |
| nr | gi|743809430|ref|XP_010928604.1| | 5.23E-165 | PREDICTED: probable receptor-like protein kinase At2g39360 [Elaeis guineensis] |
| Swissprot | tr|Q8LKZ1|NORK_PEA | 9.00E-62 | Nodulation receptor kinase (Precursor) |
| trEMBL | tr|K3YDZ1|K3YDZ1_SETIT | 4.00E-155 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si012450m} (Fragment) |
| TAIR | AT3G59110 | 9.00E-61 | Protein kinase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000063 | 4728615 | 4738072 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015339
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module2 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00069.24 | Pkinase | 95 | 356 | 5.50E-44 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| Protein Kinases Family | RLK-Pelle_URK-2 |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006468 | Biological Process | protein phosphorylation |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004672 | Molecular Function | protein kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 17.070 |
| SRR2545915 | Juvenile tuber | 8.210 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 27.490 |
| SRR5643514 | five period of Gastrodia elata | 21.490 | |
| SRR5643515 | five period of Gastrodia elata | 18.120 | |
| SRR5643524 | five period of Gastrodia elata | 20.830 | |
| SRR5643525 | five period of Gastrodia elata | 9.540 | |
| SRR5643528 | five period of Gastrodia elata | 7.890 | |
| SRR5643658 | five period of Gastrodia elata | 7.920 | |
| SRR5643659 | five period of Gastrodia elata | 8.060 | |
| SRR5643660 | five period of Gastrodia elata | 11.040 | |
| SRR5643661 | five period of Gastrodia elata | 7.700 | |
| SRR5643662 | five period of Gastrodia elata | 7.370 | |
| SRR5643663 | five period of Gastrodia elata | 9.650 | |
| SRR5643664 | five period of Gastrodia elata | 7.030 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 24.370 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 24.150 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 27.890 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 24.540 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 28.710 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 32.700 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 22.140 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 27.570 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 30.960 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 33.760 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 44.170 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 44.170 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 13.53 |
| Juven | Juvenile tuber | 7.16 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 40.21 | |
| Mother_Juven | Mother tuber of Juvenile | 11.02 |