Detail information of GWHGAAEX015359/evm.TU.scaffold_66.25
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| KOG | KOG1992 | 0 | Nuclear export receptor CSE1/CAS (importin beta superfamily) |
| nr | gi|672119875|ref|XP_008783188.1| | 0 | PREDICTED: exportin-2 isoform X1 [Phoenix dactylifera] |
| Swissprot | tr|Q9ZPY7|XPO2_ARATH | 0 | Exportin-2 |
| trEMBL | tr|A0A061DTJ9|A0A061DTJ9_THECC | 0 | Cellular apoptosis susceptibility protein / importin-alpha re-exporter, putative isoform 1 {ECO:0000313|EMBL:EOX95682.1} |
| TAIR | AT2G46520 | 0 | cellular apoptosis susceptibility protein, putative / importin-alpha re-exporter, putative |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000073 | 1125664 | 1128970 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015359
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03810.18 | IBN_N | 30 | 101 | 1.20E-11 |
| PF08506.9 | Cse1 | 157 | 522 | 3.80E-121 |
| PF03378.14 | CAS_CSE1 | 546 | 965 | 1.70E-145 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| -- | -- | -- | -- |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006886 | Biological Process | intracellular protein transport |
| GO:0008536 | Molecular Function | Ran GTPase binding |
| GO:0005515 | Molecular Function | protein binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 19.440 |
| SRR2545915 | Juvenile tuber | 20.980 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 20.590 |
| SRR5643514 | five period of Gastrodia elata | 23.540 | |
| SRR5643515 | five period of Gastrodia elata | 21.490 | |
| SRR5643524 | five period of Gastrodia elata | 23.730 | |
| SRR5643525 | five period of Gastrodia elata | 12.560 | |
| SRR5643528 | five period of Gastrodia elata | 13.010 | |
| SRR5643658 | five period of Gastrodia elata | 17.130 | |
| SRR5643659 | five period of Gastrodia elata | 24.700 | |
| SRR5643660 | five period of Gastrodia elata | 24.300 | |
| SRR5643661 | five period of Gastrodia elata | 19.590 | |
| SRR5643662 | five period of Gastrodia elata | 20.320 | |
| SRR5643663 | five period of Gastrodia elata | 20.330 | |
| SRR5643664 | five period of Gastrodia elata | 16.700 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 23.020 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 41.600 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 24.230 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 22.150 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 18.960 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 19.900 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 24.180 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 23.380 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 28.820 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 27.190 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 29.260 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 29.260 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 18.84 |
| Juven | Juvenile tuber | 22.93 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 14.25 | |
| Mother_Juven | Mother tuber of Juvenile | 15.94 |