Gene detail

Detail information of GWHGAAEX015361/evm.TU.scaffold_66.29

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672174164\|ref\|XP_008807233.1\|	5.96E-119	PREDICTED: B2 protein-like [Phoenix dactylifera]
Swissprot	tr\|P37707\|B2_DAUCA	1.00E-96	B2 protein
trEMBL	tr\|I1HNI2\|I1HNI2_BRADI	4.00E-110	Uncharacterized protein {ECO:0000313\|EnsemblPlants:BRADI2G40870.1}
TAIR	AT5G42050	8.00E-94	DCD (Development and Cell Death) domain protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000073	1227443	1231401	-

Transcript Sequence
>GWHTAAEX015361 AGCTGCTCTACCTTAAAAACTTGTGGAGGTGTTGGCTATATATATTTTGGAGAATCAACACAGCACGCGTCTTAAATTATGGCAAGGTTTTAATGTTTGGGATTCCGGCGGTGTAAAATGTACAATCTGATCGATCACCATTAATGGAGAAGGGCTGATGCTCTATCGAGGAGCATGACACAAAATAAATTCTCTTATATATAAGTTAACTGGGAAAAATTGATTTTTTTAAGAGATAAAAGCTTAAATATGCTTGTTTCATTTAGCAATACATGCATGGTGAACTTCAAAGGCCTTACTGTTTCAGAGAGATTTCCTCATTTTTGCCAAATAGCTAATAGAGTCCTATGAAGCTTCTGAATCTAGAATGAAGAGAACTCTCGAAAGTTTTCATATTACTCTTAAAAATGATAGTTTTTTTTTTTTTTAATTTGAGAAGGCTTGTGATGCACAAGGGATGGACCTTTGCTTGATTGTCAGTCATTTTCTATATTCTCGGATACCACCACTAGATCTTAAACAGATTCTGGCAACCGAATGAAGACTTTTGAGCCAAATATCTTTTTGGGAAAGTGCAGAGATCTCTGTTCTCTTTGCAACTTGTGGGGAGCAATTTCCTTTATGCTCTGAAGATTTCTGCGTTCGGTTCTGTTTCTTTGATAGAAGGATCTGTGAGAGAAAGACGTTGATACTGAGTTGCGCTGTTAACAATCTTTTTTGTTGGACGAAGCTAGATGCAAGACTAGCTAGTTCAAGGGTACCATCTCATCCCGACAAACACCTTTGCACTCAAGTCAGCGCTTGGAATTGTTCTCGTTCGGCTGCTCCCCCGCGCTCGCCCTACAATCCGCATTCGCTCGGATGCTCCGCTCGCCCGTCGTAAGCGCCTAATATTTCTTTTGATGCAAAATTGAAGTACAGTGTCTGCGGGTGATCTCATTTAGGTTAACATCAATCCAAACATCTCCTAATCATAGAAAATTAATCTCTTCTTATATTAAATTAGCTTTTATTTTGTTAAGAAAACATGATATTATTATGCGGATAATCCGCATTTTCTTGGCGGGTTGAATTAGATTTTATCCGCATAATTGTTAAATAAAAGTATAAAACTAATGATAATAATTGTAATGCACTTCCAATACACGCGTCGCCCGCAGGCTCCAACCTAGAAACTTCGCATTTTCCAACTTTCCACTATATAGACCACTGACCACTCGGCGCCTCCTCTGCATCATTTCGTCGAGCACCTTGGTAGCATCATCACAGCGCAGCCCACAAATTCCCAATTGAATCATCCATCTTCTTCTCAGCATCTAATCACCGGCATGGACGGCGGCAGAGATGAGTCGACCTTCTGGAATTTCAGCGACCAGCTTCGCCTCCACAGCGCCGGCATCTCAAGCCTTTCCCTCGGAGATAGCATATGGTCCGACGGAGGCTGGAAGACGGGCTTCGATCTCCCTCAAAAGCTTGCGTTTACTAACAACAACCTCAATCGATACAACAACAGCAACAGCAGCAACAATTTTAATGGCGGAAATAGTCTGAAGATCGCAAAGGATTTTGACAGCGGAAACCGTGTGAATAATTACAACGGCGAGGTGAAGAATTACTTCAGCAAGGCGATTTCTAAGCCGGCGCTGAACAGCAACAATAATAACAGTACTGGCGGTGTATTTGGCGGCTCTAATAAGAAGAACAACGAGAGTATTGGTAAAGTTGGGAAGAATAAGAAGAACATCAAGGATAGCAATACCAACAATAACAGCAGCAACAACAGTAGCAGTGCTGTGGATAAGAGATTCAAGACTTTGCCGCCGTCGGAGGCGCTCCCGAGGAACGAAGCGGTGGGGGGTTACATCTTCGTATGCAACAACGAAACCATGGAGGAAAATCTGAAGAGGCAGCTCTTTGGTCTTCCTCCACGCTACAGAGACTCAGTAAGAGCAATAATCCCAGGCTTGCCTATTTTCTTGTACAACTATTCAACTCACCAGCTTCATGGAATTTTCGAGGCCGCTAGCTTTGGAGGAACAAATATTGATCCCGTAGCTTGGGAGGATAAAAAGCATCCCGGAGAATCGCGTTTTCCTGCTCAGATAAAGGTTGTGACCAGGAAGAACTGCGAACCGCTTGAAGAAGATTCATTCAGGCCAATATTGCACCACTATGATGGACCCAAATTCCGACTCGAGCTTAGTGTTCCCGAGGCACTGGCACTCCTGGATGTGTTCACAGAGGAGAACGGAGATTTAGAGTAGAGGATGCGAGAAGATACAAAGGTTTTCTGTATGGCCAGTATTTATGATCGCTTATACTGTTAAGGAGGAGTTAATTAATAATGTGTGAGCTGCAATTAACAGACAGCATAATGTAATAATAATATGGCATTGCTGTAAGAATTGTGTAAAATTTTGTTCTTTAAAGTGACTGGGGAATACTTTGTATGTGAACAATGGTTTGTATGCAATGAGGTTTTGTCAATAATATAGGACCTATTGTTCTTGCTGGAAATGAAAATAAAAATGAGACTGCATAGTTTGATTATCATTATTCTTGATATAAAATGCTTTTTCACCTCTTAAATTGCAGGCTGGTTTCAGTTTATGAACATGATCGTAGAGTTTCATGGAGCTTCAATAAGGCTTCATGGAGCAAGAGGTAAACTCAAAATTACATACAAAATCCATTTTTTATCTCTCAAATAAAATGACCTATTCTGTATCGCTTGAAGGTTTTATTATGCCAACCAATTGAGGCCCAAAAGAGTAACAATACCAAATAAAAAAAAATAGAAGCTATTCAAAAACCTAGGGAGGAATAACGGCTGATATCCCCCACTGCAATAAGCTAATGCATAAACATGGTGAGAAATCGAAGAAGAAAGCAATAGTATTCTCTCACATTATATCATCATCTTGCTTACCTCAAAATTACACTTTTATAACGGTTCACATTTTCAAGTGTTGCGATTGATTTTTGGTTTGTTCTCGTCTTGGATCATAACCCATTCTTCTCCTTTTTTTCTTTTTTTAATTCAACCTATCATGTGTTTTGTGTTGTATGGTGCTTGGTTAGGGTTAGGGTTTCCTCGTGTGGAGAGTCAAGTGCGAATGTAAAATATCAG

Network for GWHGAAEX015361

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
Module1

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF10539.8	Dev_Cell_Death	176	303	6.00E-40

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	207.980
SRP064423	SRR2545915	Juvenile tuber	527.060
SRP108465	SRR5643513	five period of Gastrodia elata	97.430
	SRR5643514	five period of Gastrodia elata	106.090
	SRR5643515	five period of Gastrodia elata	221.850
	SRR5643524	five period of Gastrodia elata	118.100
	SRR5643525	five period of Gastrodia elata	615.560
	SRR5643528	five period of Gastrodia elata	588.020
	SRR5643658	five period of Gastrodia elata	667.890
	SRR5643659	five period of Gastrodia elata	211.690
	SRR5643660	five period of Gastrodia elata	150.200
	SRR5643661	five period of Gastrodia elata	222.270
	SRR5643662	five period of Gastrodia elata	218.880
	SRR5643663	five period of Gastrodia elata	174.430
	SRR5643664	five period of Gastrodia elata	355.470
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	188.480
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	188.600
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	159.250
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	134.460
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	112.420
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	118.300
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	218.140
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	125.220
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	166.550
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	251.820
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	176.820
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	176.820
SRP279888	Gastro	Gastrodia elata tuber	161.44
	Juven	Juvenile tuber	52.58
	Mother_Gastro	Mother tuber of Gastrodia elata	261.80
	Mother_Juven	Mother tuber of Juvenile	112.43