Gene detail

Detail information of GWHGAAEX015382/evm.TU.scaffold_66.56

Functional Annotation

Database	Orthologs	E value	Annotation
KOG	KOG1845	5.00E-55	MORC family ATPases
nr	gi\|694997484\|ref\|XP_009399626.1\|	0	PREDICTED: MORC family CW-type zinc finger protein 4-like isoform X1 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|J3MFY0\|J3MFY0_ORYBR	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:OB06G29240.1}
TAIR	HS20560930	5.00E-55	Unannotated protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000073	1810204	1858746	-

Transcript Sequence
>GWHTAAEX015382 CCTAACTGTACCCTAACTGAAGGGCACAATCGGTGCCTTTCTGCTCTCTCTTCCTCTGTATACGGCTTGCGTCCACAGTACTCATGGTTGCACGCGAAGATCAGGTTTATTGAAGTTATAAATCCCTGTATAACTTGAATTGCAGAAGATAGTTTTGGTTGCTCTAGCTCGCTGGAGAAGTCTGCTTCTCTTTTCTCGTTGGATTCGTTCTGTTGCTTCCTCGTGCTGTTCTCTTGGCTTGATTGGTTGCCTTATATTGTATCAACTTCAAGTTCAGAATCGCTGAAGGCAAAGCTTGAAGCGGTTTGTGCCGTCTTTTTAATATGCAGCCACCAATCGAGGAACGATCTGCTTACGTGTTGCTGATTCAAGATAACAAGCCTATTTGTCGCACCAGGTGTTCTGGTGACTTACCATCAAAAATTCCGGATACTTGGACAATTTCCAAGTATAAAACTCGCTCTTGTTTCCAGTGGAATAATTTTCCGAAATTTATTTTGCTCCCTGAACCTCAAAATGTTCATCAGGTGAGAGAATGGGGACAGTTTTTGTCTTATTTACAGCGGGAAGGAAAGGTTGCTGTTGCGTACACTGGTTGTTTCAATTTTTACATACTTGCAAATGGAGATGGCACAACCCATTGTACAGTTCATCATTGGATGCAAAATTCTTCTGGTCATAAAAAAAATGCTGCAGTTAATCATCATCCCAGGGATTCTATGAATTTTCTTAAGGAGCCTGATAGAAGCAGCAGAAGTCTGCAAAGGTCTGCACCCATTTGTCCAAGTCCCAGCTCGTTGTCTTTTTTTGAAGATATTGTTATGGATTCTGAGAATTTGAGAAACAATAATCATACTGCTGACAATACATTCAAATCTGCGAAGGGCAGAGACTTTGTATCTATTATTCAAGAATGCAATGATGTGGAGACGAGCAGAAAAACTACACAGCAACGTGTTTCTGATAATGACATTCATTTTGACAGTGCTACATCTGATCATACTGATGGGATGATATCAGATTTTAGACAAAAGAACAATGTGATGATGGATCCAAGTTATTTGACAACTCTCAGTCAGACTCATTCTTGGATTTTTGGGGCGATAGCTGAACTTGTTGATAACTCAAGGGATGCCCATGCAGCTAGATTGGAAATATCTGTTGAGCTTCTATATTCTAAAAGGGATGGAAACAAAATTCCTGTTTTGTCAATTATTGATGATGGGGATGGAATGATTCATAATGAAATCTTGAGAATGGTTTCTTTCGGACATAAACAGACAGATGAACATCATGACCGTATTGGAAAATTTGGTATTGGATTCAAGACTGGAGCTATGAAACTTGGAAAAGATGCACTTGTACTTACACAGACTTCAGAATCCAGATCTATTGCTTTTTTATCACAGTCATACAACAAGAACAAACACAACATAGAGGTTCCTATAGTTTCTTATACTAAAAATGGTCGTTACATGGACATAGATCTGAATATCCAATCAGAAGAATTTGCACAATTCAATTTGAGTGCCATAAAGGAATTTTCTCCATTTAATGAATACTTGCTAGGAGAGCAGCTTGGGTTATTTGGCTTAAATGGAACTGGCACACAGATTTTCATTTGGAACTTAGACAAATGGAGTTCAGACTATACTTTGGTATGGAATGATAGAAAAGGTAGTGGAAGTTGTGATCAAGGAGAGGGAGACATACTAATCCGTTCAAGGAGGATAAGATCACGCCTTGGTCAAATAAGCCATGAGGTTCCTTTGGATTATTCCCTTAAGGCATATCTGGAAGTTCTTTTCTTAAATCCTCGCATGAAAATATTTATCCAAGACTCATTGATCAAAAGCTGTTCTTTAGAAAAGTCACTGAGTGGAACTGTAACAATAAAAGGTAGCATAATGGCTAGACCTGTCCAGCTTGCAATCGGCAGGAGTCGGATAGAATGGGAAAGAATGAACGGTGGGGTGTTTTTATACTGGAAAGGTCGGCTAATTGAGGCATACAAGCGAGTTGGTGGCATGAAGCACAATGCAGATGTAGGACGTGGTGTTATAGGAGTAGTGGATGTTACAGAAATCATGGACAATGGAAACGGAATAGTATGGGTACTTCACAGTAAACAAGGTTTTCAGGATTGTGAAGCATATGCCAAACTTGAGGATTGGCTTGGAAGCAAAGCTGACGAGTATTGGGATGAAAATTATGATAACCTTGATCTGAAAGCCAACGCTGCTCTGTATAAGCCTGATCACGAGTGGGTTCAATGCGACAAATGCCGCAAGTGGAGGATGTTGAGCTCCCGCTTCGATGCCAAAAGCCTTCCGTTACAATGGTTTTGCTTTATGCCGCCGTTCAATGGATATTGTGAAGCTCCCGAGCAGCAAGTGGAGGCAGGAGTTGTCACCGTGGCTGCTATGCGATGCCAGCAGCAAGAGTCTTCGATACCTCTTGCTATTAAAGCTGCGAGCAATGAAGCAGATTCCCAGAGAAAAAATGATGCTACAGTGTGCGAAGAGTGGGGCAGGCAGAAAAGGAGGTCCAACAGACTGCTTAAAGCGACAGAGCAGGCAACTCCATGTGCTACAACTACTGATTTAAAGCCTGTTCAAGCAAAGAACTTTAAATGAATGGAATTCGGGAGAAAGACTGATCCCCGAAAGACTGATCCAAAGCTTAACTCCAGAGAAAAGAATGTTTCTTTTGTAGAATAGTTACACAGCTTACTGCAGATTAGAAAACCCATAGATGAAAACTCTTATGCTCAAGTACAGGAGAGTGCCTAAATTGTAAATGTAATGTAAACTCTTTAGTAGGTATGGTGATTTTTTTCATTTTTGTAGAGAATCCGCTGAGTGGTTTAGAAGTTTGATGGTTCCTTCATTTACTGTATAGAACTAATGGTTTAGGTTTAGAGCTTCTTATAATATAGTATATTTTTGTCATTGATTGCCTATTTCTATTTTGATGTGTGGAAATCTGGCATATTTGTTCTGTTTAGCCCAGTCATGATGATTTTTTTGTTGTGAAGGGCAGCTGTATTCCCGGGGAGGCTTGAATCTCCTTAAGGATGACAGTAAAATTTGATCCCGTTTGATTGTACTTGATAGGCCCAGGTTATTTTTTTCTAAAATCTGACATAGTTGTTAATGTATAATTTCAAAACTTGAA

Network for GWHGAAEX015382

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF13589.5	HATPase_c_3	259	379	2.90E-21
PF07496.14	zf-CW	647	689	6.80E-11

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0008270	Molecular Function	zinc ion binding

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	18.330
SRP064423	SRR2545915	Juvenile tuber	14.940
SRP108465	SRR5643513	five period of Gastrodia elata	9.410
	SRR5643514	five period of Gastrodia elata	8.850
	SRR5643515	five period of Gastrodia elata	9.720
	SRR5643524	five period of Gastrodia elata	6.940
	SRR5643525	five period of Gastrodia elata	12.560
	SRR5643528	five period of Gastrodia elata	10.480
	SRR5643658	five period of Gastrodia elata	11.160
	SRR5643659	five period of Gastrodia elata	9.600
	SRR5643660	five period of Gastrodia elata	9.670
	SRR5643661	five period of Gastrodia elata	8.350
	SRR5643662	five period of Gastrodia elata	7.910
	SRR5643663	five period of Gastrodia elata	8.210
	SRR5643664	five period of Gastrodia elata	9.170
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	8.870
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.810
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	8.110
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	10.970
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	9.860
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	11.220
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	9.720
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	9.360
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	8.450
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	8.380
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.630
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.630
SRP279888	Gastro	Gastrodia elata tuber	13.67
	Juven	Juvenile tuber	14.33
	Mother_Gastro	Mother tuber of Gastrodia elata	15.21
	Mother_Juven	Mother tuber of Juvenile	14.10