Detail information of GWHGAAEX015385/evm.TU.scaffold_66.60


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|161089460|gb|ABX57720.1|3.33E-163sesquiterpene synthase [Vanda hybrid cultivar]
Swissprottr|Q6Q3H3|TPSGD_VITVI6.00E-125(-)-germacrene D synthase
trEMBLtr|A9YCD2|A9YCD2_9ASPA1.00E-163Sesquiterpene synthase {ECO:0000313|EMBL:ABX57720.1}
TAIRAT5G239602.00E-79terpene synthase 21

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007320212422024933+
Transcript Sequence

Network for GWHGAAEX015385

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module2

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01397.20Terpene_synth201887.40E-45
PF03936.15Terpene_synth_C2214348.60E-75
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15803GERD Sesquiterpenoid and triterpenoid biosynthesis map00909

Gene Ontology

GO term OntologyName
GO:0010333Molecular Functionterpene synthase activity
GO:0000287Molecular Functionmagnesium ion binding
GO:0016829Molecular Functionlyase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.000
SRR2545915Juvenile tuber0.000
SRP108465SRR5643513five period of Gastrodia elata35.220
SRR5643514five period of Gastrodia elata25.850
SRR5643515five period of Gastrodia elata25.190
SRR5643524five period of Gastrodia elata25.530
SRR5643525five period of Gastrodia elata0.060
SRR5643528five period of Gastrodia elata0.070
SRR5643658five period of Gastrodia elata0.050
SRR5643659five period of Gastrodia elata0.110
SRR5643660five period of Gastrodia elata0.060
SRR5643661five period of Gastrodia elata0.000
SRR5643662five period of Gastrodia elata0.000
SRR5643663five period of Gastrodia elata0.000
SRR5643664five period of Gastrodia elata0.270
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_120.240
SRR6049655Rhizomagastrodiae_C368-T10_good_110.770
SRR6049656Rhizomagastrodiae_C368-T07_good_131.700
SRR6049657Rhizomagastrodiae_C368-T07_good_112.980
SRR6049658Rhizomagastrodiae_C368-T04_good_11.910
SRR6049659Rhizomagastrodiae_C368-T04_good_11.160
SRR6049660Rhizomagastrodiae_C368-T01_good_12.280
SRR6049661Rhizomagastrodiae_C368-T04_good_11.050
SRR6049662Rhizomagastrodiae_C368-T01_good_14.290
SRR6049663Rhizomagastrodiae_C368-T01_good_10.950
SRR6049664Rhizomagastrodiae_C368-T10_good_144.360
SRR6049665Rhizomagastrodiae_C368-T10_good_144.360
SRP279888GastroGastrodia elata tuber 0.00
JuvenJuvenile tuber0.39
Mother_GastroMother tuber of Gastrodia elata 10.27
Mother_JuvenMother tuber of Juvenile 2.89