Detail information of GWHGAAEX015387/evm.TU.scaffold_66.63


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|659113553|ref|XP_008456637.1|1.71E-14PREDICTED: uncharacterized protein LOC103496534 [Cucumis melo]
trEMBLtr|W9RY30|W9RY30_9ROSA3.00E-14Uncharacterized protein {ECO:0000313|EMBL:EXB97698.1}
TAIRAT5G184402.00E-11Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007320336852034874-
Transcript Sequence

Network for GWHGAAEX015387

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module6

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14404CPSF4, YTH1 mRNA surveillance pathway map03015

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms10.160
SRR2545915Juvenile tuber13.060
SRP108465SRR5643513five period of Gastrodia elata6.950
SRR5643514five period of Gastrodia elata7.260
SRR5643515five period of Gastrodia elata5.530
SRR5643524five period of Gastrodia elata8.860
SRR5643525five period of Gastrodia elata5.880
SRR5643528five period of Gastrodia elata8.190
SRR5643658five period of Gastrodia elata9.470
SRR5643659five period of Gastrodia elata9.340
SRR5643660five period of Gastrodia elata8.570
SRR5643661five period of Gastrodia elata8.390
SRR5643662five period of Gastrodia elata7.930
SRR5643663five period of Gastrodia elata8.730
SRR5643664five period of Gastrodia elata10.230
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_13.170
SRR6049655Rhizomagastrodiae_C368-T10_good_12.700
SRR6049656Rhizomagastrodiae_C368-T07_good_14.720
SRR6049657Rhizomagastrodiae_C368-T07_good_13.210
SRR6049658Rhizomagastrodiae_C368-T04_good_11.540
SRR6049659Rhizomagastrodiae_C368-T04_good_12.030
SRR6049660Rhizomagastrodiae_C368-T01_good_12.570
SRR6049661Rhizomagastrodiae_C368-T04_good_11.650
SRR6049662Rhizomagastrodiae_C368-T01_good_11.480
SRR6049663Rhizomagastrodiae_C368-T01_good_11.020
SRR6049664Rhizomagastrodiae_C368-T10_good_14.360
SRR6049665Rhizomagastrodiae_C368-T10_good_14.360
SRP279888GastroGastrodia elata tuber 5.82
JuvenJuvenile tuber9.55
Mother_GastroMother tuber of Gastrodia elata 3.25
Mother_JuvenMother tuber of Juvenile 5.87