Detail information of GWHGAAEX015394/evm.TU.scaffold_66.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|374994188|ref|YP_004969687.1|4.00E-06hemolysin III family channel protein [Desulfosporosinus orientis DSM 765]
KOGKOG07489.00E-83Predicted membrane proteins, contain hemolysin III domain
nrgi|720079192|ref|XP_010241589.1|6.70E-91PREDICTED: heptahelical transmembrane protein 1-like [Nelumbo nucifera]
Swissprottr|Q93ZH9|HHP1_ARATH3.00E-83Heptahelical transmembrane protein 1
trEMBLtr|M0TTH1|M0TTH1_MUSAM8.00E-90Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P25180_001}
TAIRAT5G202709.00E-83heptahelical transmembrane protein1

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007324676792468676-
Transcript Sequence

Network for GWHGAAEX015394

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03006.19HlyIII192041.30E-56
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07297ADIPOR AMPK signaling pathway map04152
Adipocytokine signaling pathwaymap04920
Longevity regulating pathwaymap04211

Gene Ontology

GO term OntologyName
GO:0016021Cellular Componentintegral component of membrane

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms11.180
SRR2545915Juvenile tuber48.320
SRP108465SRR5643513five period of Gastrodia elata47.400
SRR5643514five period of Gastrodia elata48.920
SRR5643515five period of Gastrodia elata33.220
SRR5643524five period of Gastrodia elata44.870
SRR5643525five period of Gastrodia elata57.610
SRR5643528five period of Gastrodia elata27.750
SRR5643658five period of Gastrodia elata41.200
SRR5643659five period of Gastrodia elata18.700
SRR5643660five period of Gastrodia elata12.700
SRR5643661five period of Gastrodia elata15.360
SRR5643662five period of Gastrodia elata17.170
SRR5643663five period of Gastrodia elata23.250
SRR5643664five period of Gastrodia elata12.760
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_137.080
SRR6049655Rhizomagastrodiae_C368-T10_good_134.850
SRR6049656Rhizomagastrodiae_C368-T07_good_141.760
SRR6049657Rhizomagastrodiae_C368-T07_good_136.310
SRR6049658Rhizomagastrodiae_C368-T04_good_124.800
SRR6049659Rhizomagastrodiae_C368-T04_good_120.340
SRR6049660Rhizomagastrodiae_C368-T01_good_129.250
SRR6049661Rhizomagastrodiae_C368-T04_good_138.540
SRR6049662Rhizomagastrodiae_C368-T01_good_168.770
SRR6049663Rhizomagastrodiae_C368-T01_good_149.430
SRR6049664Rhizomagastrodiae_C368-T10_good_139.920
SRR6049665Rhizomagastrodiae_C368-T10_good_139.920
SRP279888GastroGastrodia elata tuber 24.80
JuvenJuvenile tuber58.29
Mother_GastroMother tuber of Gastrodia elata 55.15
Mother_JuvenMother tuber of Juvenile 50.28