Detail information of GWHGAAEX015400/evm.TU.scaffold_66.76


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|586754469|ref|XP_006852833.1|5.37E-10hypothetical protein AMTR_s00033p00185760 [Amborella trichopoda]
trEMBLtr|U5CWG8|U5CWG8_AMBTC2.00E-10Uncharacterized protein {ECO:0000313|EMBL:ERN14300.1}

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007326988422722418-
Transcript Sequence

Network for GWHGAAEX015400

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10471.8ANAPC_CDC261306.30E-06
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0031145Biological Processanaphase-promoting complex-dependent catabolic process
GO:0030071Biological Processregulation of mitotic metaphase/anaphase transition
GO:0005680Cellular Componentanaphase-promoting complex

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms26.340
SRR2545915Juvenile tuber20.870
SRP108465SRR5643513five period of Gastrodia elata48.350
SRR5643514five period of Gastrodia elata40.810
SRR5643515five period of Gastrodia elata39.750
SRR5643524five period of Gastrodia elata41.010
SRR5643525five period of Gastrodia elata52.840
SRR5643528five period of Gastrodia elata55.270
SRR5643658five period of Gastrodia elata49.830
SRR5643659five period of Gastrodia elata51.480
SRR5643660five period of Gastrodia elata50.320
SRR5643661five period of Gastrodia elata59.870
SRR5643662five period of Gastrodia elata53.000
SRR5643663five period of Gastrodia elata55.930
SRR5643664five period of Gastrodia elata54.670
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_143.480
SRR6049655Rhizomagastrodiae_C368-T10_good_142.500
SRR6049656Rhizomagastrodiae_C368-T07_good_137.860
SRR6049657Rhizomagastrodiae_C368-T07_good_143.330
SRR6049658Rhizomagastrodiae_C368-T04_good_132.170
SRR6049659Rhizomagastrodiae_C368-T04_good_133.860
SRR6049660Rhizomagastrodiae_C368-T01_good_137.190
SRR6049661Rhizomagastrodiae_C368-T04_good_134.520
SRR6049662Rhizomagastrodiae_C368-T01_good_136.470
SRR6049663Rhizomagastrodiae_C368-T01_good_139.580
SRR6049664Rhizomagastrodiae_C368-T10_good_154.690
SRR6049665Rhizomagastrodiae_C368-T10_good_154.690
SRP279888GastroGastrodia elata tuber 58.81
JuvenJuvenile tuber53.14
Mother_GastroMother tuber of Gastrodia elata 63.10
Mother_JuvenMother tuber of Juvenile 51.39