Gene detail

Detail information of GWHGAAEX015401/evm.TU.scaffold_66.77_evm.TU.scaffold_66.78

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|189501781\|ref\|YP_001957498.1\|	1.00E-25	hypothetical protein Aasi_0340 [Candidatus Amoebophilus asiaticus 5a2]
KOG	KOG0509	0	Ankyrin repeat and DHHC-type Zn-finger domain containing proteins
nr	gi\|672130523\|ref\|XP_008788793.1\|	0	PREDICTED: protein S-acyltransferase 24-like [Phoenix dactylifera]
Swissprot	tr\|Q52T38\|ZDH22_ARATH	0	Protein S-acyltransferase 24
trEMBL	tr\|M0SE99\|M0SE99_MUSAM	0	S-acyltransferase {ECO:0000256\|RuleBase:RU079119}
TAIR	AT5G20350	0	Ankyrin repeat family protein with DHHC zinc finger domain

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000073	2765484	2807703	+

Transcript Sequence
>GWHTAAEX015401 ATTCACTCTCTTCTTTCTTTGTGCAATTTCTTCGAATTTTTATCGTTTTTTTGGTCCAAAATCCGGCGAGCCCAGTCAACTCAGCGCCCTCCGGCTTCTTCCAATTCTCATCTCAAAATCCGCCTTCTTTCCTCTCTCTCATCCTCGCTCCGACGTCGCGCAGTTGGCCTTCCCTGTCCATGGCGTCGGAGATCGAGGTTGTGGAGGAGGATGACCGAAGGGATGCCTCTCACACAGGCGTTAACATCGCTGTCGCCGTCCTGTCTTCTTCAGCAGCAACCTCTACTGATGCAGAGGAGGAAACGCAGAAAAACGACGTCTACACAGCTTCTGCCTATGGCGATTTCGAGAAGCTGCAGAGACTGGTGGAGTCCGAGGGCTGCTCCGTTACGGAGCCTGACGGCGGTGGTTATTACGCCCTTCAGTGGGCTGCCCTCAATAATCGCACTGCCGCTGCACAATATATCATTGAGCACGGAGGAGATGTGAATGCGCTTGACTACACAGGGCAGGCCGCTCTTCATTGGAGTGCGGTGCGTGGCCACATCCCTGTTGCCGAGCTCTTGCTCAAGGAAGGCGCTCGAGTTGATATTGCAGACCACTACGGTTATCAGACTACCCACGTAGCAGCTCAGTACGGTCAGACAGCATTTCTCTACCACATAGTTACAAAATGGAATGCTGATCCTGATGTACCTGATAAAGATGGAAGAAGTCCTCTTCATTGGGCTGCTTATAAGGGGTTTGCTGATACTATACGTCTTCTTTTATTTTTAGATGCATACAGGGGGAGGCAGGACAAGGAAGGTTGTACTCCTCTTCATTGGGCGGCTATCAAAGGGAATTTAGAAGCATCCACTGTACTTGTACAGGATGGCAAAAAGGAGGACCTGATGGTGACAGATAATACTGGTTCCACTCCAGCACAGCTAGCTGCTGATAAGAATCATCGGCAAGTTGCATTTTTCCTTGGTAATGCCAGAAAATTGTTTGATAGACGATGTGATGGAAACAATTATTTTGGGAGATTATCAAAATTAGGACTTGCTCCTATGCTTTGGTGCATTATTATCTCCCTGCTTATTACATATGTAAATTCAGTAGTAACAGGAGCAACCTTTTCAAGATTGACAGCGGCATTTGGGCTTGTTGCATGGTTGGGGGTTATACTTGCAAGTTCAGGATTATTTATGTTCTATAAGTGTAGTAGGAAGGACCCAGGATATATCAAAAGAAATGTTCGAGATTCACAGAATCTTAGAGATGATGAACCTCTGGTTAAGACAGAACTAGAAAATCCTGCTTTACTAGCAGGAAATTGGTCTCAATTGTGCACAACTTGCAAGATAGTCAGGCCTATGCGGGCAAAGCACTGTTCCACATGTGATAGATGTGTTGAGCAGTTTGACCATCACTGCCCATGGGTATCAAATTGTATTGGCAAGAGGAATAAATGGAATTTCTTCATGTTTCTTCTACTCGAAGTTTCTGCCATGATTATTACTGGTTCAGTCACAATCATAAGAATTGCAACAGATCCGACCGCCCCATCATCTTTCGGCGCTTGGTTAAGTCATTCTGCTATTCATCATTTGGGCGCATTGTCATTCCTCATAATGGACTTTCTTCTTTTCTTCGGGGTTGCTGTTTTAACCATTGTACAGGCACAACAGATTTCGAGGAACATTACGACGAACGAGATGGCAAATGGAATGCGGTACAAGTATTTGAAGGGACCCGGCGGCAAGTTCAGAAACCCGTATGACCACGGCGTCCGCAAAAACTGCTCGGATTTCCTAATAAAGGGCTATAATGAGGACATTGAGCTGACTGAGCCGAGTTCGATTTATGAAAATATAAGCATTATTCAGATGACGAATATGGTCTCGCGGAATGGTGATGACCAATCCTCTGAATGTGTTAACGGCAATGGGCATGTTTCCATCGATGTCGAATCTAAAGGCCCTTCACGGGCCCACACGCACTCCTCAAACTGCAGCCATGGTAAAGGCGGTGATGGTGGAGGAGGCCAGAGGGGCAGTAGGATCCCCTTTGGGTTGGGTTTAGGGCTTGGAAGGAACAATGCTCGCCACAATTCCCGTTCAGTTCTCGCCACATAACCTCTTCAAATTTGAATGTCTGATATGTTTGTTCATATATATTTATAGATATGCTTCTCCATTTATTTCATGCTTTTTATGAGAATGAAGTTTGTTTTAAGCAAGGAAACTATTGATTCCATTCAGTTTTTTTAGGGTTTAGCATTTTTCTTTATGTTTTGGGTTTAAAGAAAGATTGTAGAATGATTAAGCCAATAGATTTACTTAGATTGTGGATTATTTATTACGGGAAAGAACTGTTGATATATGTCAATGAATCGAGTTGTGCTATAAACCCAAGTATGTGAATTGTTGCATGTTCTATGCACTTTCATTTTTTTTTTATAATATTGTTGAAAATATAATCTTTGGATAGCTGTGGGCATATTGATGCAATAAAATGATATTCCTC

Network for GWHGAAEX015401

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF12796.6	Ank_2	50	140	7.60E-11
PF12796.6	Ank_2	148	234	2.10E-12
PF01529.19	DHHC	383	510	1.70E-32

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0005515	Molecular Function	protein binding
GO:0016409	Molecular Function	palmitoyltransferase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	37.840
SRP064423	SRR2545915	Juvenile tuber	24.960
SRP108465	SRR5643513	five period of Gastrodia elata	37.140
	SRR5643514	five period of Gastrodia elata	32.390
	SRR5643515	five period of Gastrodia elata	35.750
	SRR5643524	five period of Gastrodia elata	34.540
	SRR5643525	five period of Gastrodia elata	34.920
	SRR5643528	five period of Gastrodia elata	41.260
	SRR5643658	five period of Gastrodia elata	43.640
	SRR5643659	five period of Gastrodia elata	23.160
	SRR5643660	five period of Gastrodia elata	25.500
	SRR5643661	five period of Gastrodia elata	25.000
	SRR5643662	five period of Gastrodia elata	27.080
	SRR5643663	five period of Gastrodia elata	22.330
	SRR5643664	five period of Gastrodia elata	27.240
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	40.240
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	50.210
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	38.430
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	45.400
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	45.070
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	56.710
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	47.350
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	44.500
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	35.730
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	42.440
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	43.470
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	43.470
SRP279888	Gastro	Gastrodia elata tuber	30.55
	Juven	Juvenile tuber	36.97
	Mother_Gastro	Mother tuber of Gastrodia elata	63.70
	Mother_Juven	Mother tuber of Juvenile	62.12