Detail information of GWHGAAEX015402/evm.TU.scaffold_66.79


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|116748738|ref|YP_845425.1|7.00E-28hypothetical protein Sfum_1298 [Syntrophobacter fumaroxidans MPOB]
KOGKOG30867.00E-160Predicted dioxygenase
nrgi|475495647|gb|EMT03863.1|1.22E-172hypothetical protein F775_30704 [Aegilops tauschii]
trEMBLtr|M8BAV5|M8BAV5_AEGTA5.00E-173Uncharacterized protein {ECO:0000313|EMBL:EMT03863.1}
TAIRAT2G252807.00E-160Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007328176172862283-
Transcript Sequence

Network for GWHGAAEX015402

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01875.16Memo82851.00E-80
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms111.260
SRR2545915Juvenile tuber89.570
SRP108465SRR5643513five period of Gastrodia elata62.030
SRR5643514five period of Gastrodia elata81.680
SRR5643515five period of Gastrodia elata65.210
SRR5643524five period of Gastrodia elata78.960
SRR5643525five period of Gastrodia elata74.240
SRR5643528five period of Gastrodia elata93.210
SRR5643658five period of Gastrodia elata104.680
SRR5643659five period of Gastrodia elata56.640
SRR5643660five period of Gastrodia elata62.780
SRR5643661five period of Gastrodia elata61.760
SRR5643662five period of Gastrodia elata80.050
SRR5643663five period of Gastrodia elata70.110
SRR5643664five period of Gastrodia elata79.800
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_183.570
SRR6049655Rhizomagastrodiae_C368-T10_good_156.040
SRR6049656Rhizomagastrodiae_C368-T07_good_175.120
SRR6049657Rhizomagastrodiae_C368-T07_good_189.490
SRR6049658Rhizomagastrodiae_C368-T04_good_194.380
SRR6049659Rhizomagastrodiae_C368-T04_good_1124.390
SRR6049660Rhizomagastrodiae_C368-T01_good_186.810
SRR6049661Rhizomagastrodiae_C368-T04_good_191.610
SRR6049662Rhizomagastrodiae_C368-T01_good_178.540
SRR6049663Rhizomagastrodiae_C368-T01_good_188.870
SRR6049664Rhizomagastrodiae_C368-T10_good_177.780
SRR6049665Rhizomagastrodiae_C368-T10_good_177.780
SRP279888GastroGastrodia elata tuber 70.48
JuvenJuvenile tuber59.11
Mother_GastroMother tuber of Gastrodia elata 86.94
Mother_JuvenMother tuber of Juvenile 61.15