Gene detail

Detail information of GWHGAAEX015403/evm.TU.scaffold_66.80

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|389844669\|ref\|YP_006346749.1\|	1.00E-08	nitrate/nitrite transporter [Mesotoga prima MesG1.Ag.4.2]
nr	gi\|743879223\|ref\|XP_010908361.1\|	0	PREDICTED: probable transporter mch1 isoform X2 [Elaeis guineensis]
trEMBL	tr\|M0U3V3\|M0U3V3_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr9P26960_001}
TAIR	AT1G80530	0	Major facilitator superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000073	2911098	2938026	+

Transcript Sequence
>GWHTAAEX015403 GTTACCAGCGATCCTCCGACAGAAGGAAAGTTAGCGGGAAGTAAGAGCGTGTGCGCTCCATACTCAGTTTTTTTTTTCTGTGATCTCTAAGGCGATTTTGGTTGCTCCCGGCATGCCTGCAATGAAGTCCGGCAGCCGTCCTCCGTGGGTTGGCTTGGCAGCGGCGGTCTGGGTCCAAATCGCCGCTGGCTCAGCCTACAACTTCCCGCTGTACTCGCCTGCGATTAAGGCCATACTTGGCTATAATCAGAGGCAGCTCACTTTGCTCGGCGTTGCCAATGACGTCGGTGAGAACTTTGGCATGATTCCGGGCGTCGTCTGCAATCGATTTCCGCCATGGCTGGTCCTTCTTATTGGCGCCGCTTGCTGCTTCGTCGGATACGGTGCCATCTGGCTTGCCGTGAGCAGGACCGTCGAGTTCTTGCCTTTTTGGGCGTTATGGATAGCGTTATGTATTGCTACAAATAGCAGTGCATGGTTAGGCACCGGTGTCCTTGTTACCAACATGAGAAACTTCCCTATCAGTAGGGGCACAGTTGCAGGCATTCTTAAAGGGTACGTTGGCCTTAGCGCTGCAGTGTATACTCTAATTTACACAGGGGTGCTCAGCCGCTCACCGTCCAAGTTACTACTCTTTCTTACTCTTGGCCTGCCTGCTGTTTGCCTTGCAATGATGTATTTTGTGCGCCCTTGCACTCCAGCTTCTGAGGATGACTCCTCTGAGAATGGCCATTTCTTGTTCACCCAAATTGCCTGCGTGTTTCTAGGCCTCTACCTGCTGATTTCCACATTACTTGATAATGTTCTCTCACCCGGAGGCTTCGTTACCTATATGTTTTTTGGTATAATGATCCTCTTGCTACTTTCTCCCCTTGCAATCCCATTAAAGATGACTTTGTACCCAAATGAGAAGAAGAAATTTGGTATGGCTGCTCCTTGTTCTTCTGACCAACTGTCCCAGCTAGATCAAGGTAAGACAGAACCACTACTTGCTGTGTCTTCATCGGCAACAAATCTCAGCATCTTTCATGAGTCAGACGATTCTTCTGATGTGGATATACTCTTGGCCGAAGGGGAAGGCGCCATACATGTGAAGAAGAAGAGAAAACCCAAGAGGGGAGAAGATTTTAGATTTCGCGAAGCCTTGGTCAAGGCTGATTTCTGGTTATTATTTATGGGCTATTTCCTTGGAGTTGGTTCGGGCGTTACAGTGCTGAATAACCTGGCACAAATTGGGGTTGCTGCAGGCGTTGACGATACCACCCTGCTATTGTGCCTTTTCAGCTTCTGCAATTTTGCAGGCCGTCTTGGTGGTGGTTCTGTTTCAGAGTACTATGTAAGATCAAAATTGCTTCCTCGAACCATATGGATGGCTTGCACTCAGGCGATCATGGTTGTTACTTACGTCCTCTTTGCATTGGGCATCCATGGAACTCTACATGCTTCGACGGCGCTGCTTGGCATCTGCTACGGGGTTCAGTTCTCCGTTATGGTGCCGACTGCATCCGAACTCTTTGGTTTGAAGCACTTTGGAATCATTTACAATTTCATACTGTTGGGAAATCCTTTCGGGGCTTCCTTGCTCTCTGCGGCTCTTGCCGGGTATGTCTACGATAAGGAAGCAGAGAAGCAGGGCGGAGCTACCTGCCTTGGGCCGACCTGTTTCGGACTCACGTTCTTCTGTCTTGCTGGAGTGTGCGCATTAGGATCCGTGCTGAGTGCAGTTTTAACTGTTAGAATAAGACCCGTGTACCAGATGCTTTACTCGAGTGGCTCGTTTCGCCTCCCTCGAAGTTTACAGCAGTAAAAGCTTCCTGTGGAGTTTGTTTGGATTTATCCTGATTTTGATTATGGATAAAGTTTATGCACCATGAAGCTTTTTTTGTTGTGAATTTATAATATAAATAAAATCTGTTTGCAGTACATTTACATTAGAAACTTTTGTAGAAGAAGCTCTATGAATGCTAAATTAGAGAACTTTGAACAGTGTCCAACATCTTTTCTTACTTAATTGATAGTATGATATGTTCAGTATTATCTAGCAATGATTTAGTGAATTGATCTAGACATGAATACGCTCTTAAAACCATAGAAGCATATTTAGCTTCCAAATCTTCATAGAATACACATTCATCACCCAGACTTCAATATTATCTTCATTTATTGACCTGCAATAACTGAAACCATGCACATGTATTGCTATTATTCCATTTCAATTTCATCTATAAGCAAACGAGCAGTAAAAGAACCTTATGTAGTATCTTCAAACGCACTCTAAGTTGGATTCAAGTCCTGAAACATTGAGTCCCACCTGACCAGCGCACTAGCTCCACTTTCCTCCCTGTTGCAATCATAAACCGCTAGGCTGCCATTTGCGACCATTATCCTCGCTTTCTTTGCTCTCAGCAGCTTTTTTCTGCCCGTTCCTAAGCTTGCCAGAGCAGCCGCGATTGCTGAGATGCTTCCATGAACCAGCACCTGAGCATGCTTCGCCACACTGCTGCTGAGCCTCTTTGCCGAAGAACTGATCATCTGCGACCTCCCTCTCCTTGCCATCTTGAGGATCTCCAGCCTGTGCTTACCAATTGAGATGCCCATGCTCTGGAGGAACTCGTGGTTCAACTGCTCCAGATCATCTTCCCCGAGCTCATTCACGGAGAAGAGAAGGCCATATTCATGGGCAAACGAGGGATGGAGGCTTGATTTCAAGAACCAGGCAGACCAGTTCATTGGTTAAGAGGAGGAACATCGATTTCTGCTGCTGCAGATTATTCAGG

Network for GWHGAAEX015403

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF06813.12	Nodulin-like	11	258	9.80E-89

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	10.790
SRP064423	SRR2545915	Juvenile tuber	8.940
SRP108465	SRR5643513	five period of Gastrodia elata	11.100
	SRR5643514	five period of Gastrodia elata	16.690
	SRR5643515	five period of Gastrodia elata	13.350
	SRR5643524	five period of Gastrodia elata	15.940
	SRR5643525	five period of Gastrodia elata	10.460
	SRR5643528	five period of Gastrodia elata	13.510
	SRR5643658	five period of Gastrodia elata	11.120
	SRR5643659	five period of Gastrodia elata	7.660
	SRR5643660	five period of Gastrodia elata	8.690
	SRR5643661	five period of Gastrodia elata	9.210
	SRR5643662	five period of Gastrodia elata	10.530
	SRR5643663	five period of Gastrodia elata	10.020
	SRR5643664	five period of Gastrodia elata	8.770
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	15.990
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	13.360
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	17.300
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	16.290
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	22.520
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	23.680
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	18.640
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	22.640
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	20.190
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	19.640
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	17.320
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	17.320
SRP279888	Gastro	Gastrodia elata tuber	10.28
	Juven	Juvenile tuber	8.92
	Mother_Gastro	Mother tuber of Gastrodia elata	8.27
	Mother_Juven	Mother tuber of Juvenile	7.74