Detail information of GWHGAAEX015420/evm.TU.scaffold_66.106


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|672107357|ref|XP_008806982.1|2.50E-65PREDICTED: uncharacterized protein LOC103719467 [Phoenix dactylifera]
trEMBLtr|M0TQV1|M0TQV1_MUSAM6.00E-54Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr8P15980_001}
TAIRAT4G239309.00E-46Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007339294443938628-
Transcript Sequence

Network for GWHGAAEX015420

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module1

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
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Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
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Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms42.660
SRR2545915Juvenile tuber42.570
SRP108465SRR5643513five period of Gastrodia elata54.860
SRR5643514five period of Gastrodia elata45.560
SRR5643515five period of Gastrodia elata38.540
SRR5643524five period of Gastrodia elata34.550
SRR5643525five period of Gastrodia elata122.180
SRR5643528five period of Gastrodia elata93.140
SRR5643658five period of Gastrodia elata112.410
SRR5643659five period of Gastrodia elata38.280
SRR5643660five period of Gastrodia elata43.840
SRR5643661five period of Gastrodia elata47.770
SRR5643662five period of Gastrodia elata68.510
SRR5643663five period of Gastrodia elata46.070
SRR5643664five period of Gastrodia elata106.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_141.830
SRR6049655Rhizomagastrodiae_C368-T10_good_158.830
SRR6049656Rhizomagastrodiae_C368-T07_good_136.360
SRR6049657Rhizomagastrodiae_C368-T07_good_145.840
SRR6049658Rhizomagastrodiae_C368-T04_good_129.130
SRR6049659Rhizomagastrodiae_C368-T04_good_126.310
SRR6049660Rhizomagastrodiae_C368-T01_good_131.710
SRR6049661Rhizomagastrodiae_C368-T04_good_127.490
SRR6049662Rhizomagastrodiae_C368-T01_good_139.060
SRR6049663Rhizomagastrodiae_C368-T01_good_129.960
SRR6049664Rhizomagastrodiae_C368-T10_good_139.060
SRR6049665Rhizomagastrodiae_C368-T10_good_139.060
SRP279888GastroGastrodia elata tuber 37.73
JuvenJuvenile tuber57.75
Mother_GastroMother tuber of Gastrodia elata 81.66
Mother_JuvenMother tuber of Juvenile 40.09