Gene detail

Detail information of GWHGAAEX015422/evm.TU.scaffold_66.108

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|695033889\|ref\|XP_009404432.1\|	0	PREDICTED: uncharacterized protein LOC103987763 [Musa acuminata subsp. malaccensis]
trEMBL	tr\|M0T6T8\|M0T6T8_MUSAM	0	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P13900_001}
trEMBL	tr\|M0T6T8\|M0T6T8_MUSAM	2.00E-33	Uncharacterized protein {ECO:0000313\|EnsemblPlants:GSMUA_Achr6P13900_001}
TAIR	AT3G61780	5.00E-171	embryo defective 1703

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000073	3973663	3981326	-

Transcript Sequence
>GWHTAAEX015422 CTTTTTTACATAAAAATTGGAAGCTTCTATGGGTCACCAATGCCTTTGAACTCTAAACCCTAACTGCTTCTTCATCGATTTGCTCTCGTGACTAATGGATGTTTCTTCACCTGTCAGGCCGACTATTTCCTTCTGCTACGTCTCAAGTTATTACAGTCGTAATTACACTTTTTCGATTCAATGCGGTAAGAAACCAGCAAAATATGTATTAGATCACTCGATTCCATTCCTCAAACTACCTTTATGGGGATCTTTTGCGGCTCGAAGGAGGGCGAAGCTTCCAGTTTATGCGCATTTTCGGCGACCTCCTCCGCGCCGTAATTTGCTAAGGGAGAAGCTCATTCCCAGGCAAGACCTTGCGCTTCGTCTTCCCGAAGTTTCAAACTCTGATATATCTGATTTTGAGAACTTGGGCTTAAGAGATTATGGAAACGATGCGCATGAATCAAGTATGAATTTTGATGGTGAAATGGAGTCTGGAGGAACCGATGATTCTAAAGGAAAGGTTGTTTTTGTCAATGAGGATGAAATTTCGAGAAGGGATAGAATTCAGGCATTGTCCTTGGAAGGTGGAGAGGATGGAGAAGTGAAGAATGTTAAGTATGAGATAACTCAAACAAGGCTTATGACTAAAGATATTGAAGCTGGTGCGTACCAATTGAGTAGAAATGGCTCTATTGCTAGGTTTGTGGTGGATGGAAAGAAGCCTTCTTTGGCTTGTTTATTCCATTTCATTTCAACTCACAGGAATTCTCTAGTCAAAATCTTCCCACGCATTGGTTTTATGGTTTTGTGCATTTTCTTTGTTCTGGTGGCAGTTAGGAAGTTCTTTGTAGGATATTATGATGTAGAACTGACTAAAGAAGAAACTGAAATGCTCAGGCGAAAGAAGAAATCAAGGATGGAGAGAGAGAATTCACAAAGTGGAAGTGTTGAAGTTCTTCAAAAAGGTGATGAGTTGCCTGTGATACATGGCATTATGCCTCAGATGGACAGGGATGTACTAATGGAGAACCTAATGCAAGTTAAGAGTCTTGAAGATTCATTGGTTTTACCAGATCATGCAGGTCGTTTCACTGCTGAAAAGCATGATTTTGATAAAAAGGTGAGGGAAATTAGAAATATGGTGAGAAATGTTCATGAAGCGGAGCATAAAAATCATTCACCGAAAAATAACACAGGTGAGCAGGCTGAGTTGCCTTCTAGTATTGTTGATGCTGAATTGCAAGCTGTAGGTGTTGCGGACCATGCTCATCAAAAATCACAATCTGCAAAAGAAAGTGAGCGCAATGGTAAGGAAAGCAATATTGTGAATGAAATACGAATCCTGGGTGGAGAGAAGCCTAATGCTATGGAGGGAGAACACTTGAATAATTTTGGCAATTGTGGAGGTAATGATGCTGTCAATGTTGAAGCCCAAGAAATGAGAGCCTCGGAAAATTTGCAGAAGATGCTTGTTGGTACTCATTTGATTGAACCAGGAGATCTTAATGCAGTATCTTTGAGCAACAAAAAGGAAGTTGAAACGAGCAATATGTGCAATAGTAATATGAAAGGGGAACAACCCATTAAAAGAGCATCTGCTACCTCCACCAATAAAAAAGGCAAAGCAAAAATCATAACATCACTCGAGGAAGCCAAAGAATATCTTAATTCTAAACGCAGGATTCACACAAACTCAGAGCAACCAGAGCAGCCCATTCATGTGAAAGGGGTATCAAAAGCTTTTAACAACCAGCCTGACAGTTCAGATGGTAATCTTCACATTTTAAGTGAAACTACCGAGGGATCTGGATTTTCTACTAGGTTTTCTGTAGACAATAACACTTCTTTTCAGACTGAAAGATCATATGGGAGCATTGTTTCTGATTTGATATTCAATGAAGATGAAAATAAAATTCAGAGTCTTTCTCTTCAGACTGAAGGTATTCCAAAAAAGAATGTGGAATTTCAAAATGAGAAGCTTGATTGCATTATGCAAAGAATTTCAAATGATGATGGAGCTTCTGTTTCGGACAATGTACAGACCGGACAGAATGCAGGTGTTTCTGACTTGATTTTGTATAAAAATGATGATAAAATCAAGAATTTTCCTGTTCAGACTGATGCCATCCAAAAAAAGAATGAAGACTTTCAAAATGTGGATCCAAATGGAGCCAAACAGAATTTCTTAAATGTTGATGGACCTTTTAATTTGGACAATCATCCAATGAGACACAATGCCAGTGTTAAGGATCATATCTCTTCGGGATCAAAGATTCCAAATGAAACTATTCAGCAGTATCAAACTCAAAGCTACAATGATCATCCATTTCAAAATAATCAAGTAGCAAATTCCAAAGATATCCAGCCTGAAACGCTTCCTTTGAGTGCTCTTGACAAAAATGACTGGAAAATGTTAAATAGATTGTCTCATACTCATAGTAATATTCAAGAAGAGCTGCTTGATCATGTAGTACTTGGAAATTCTGAAAATATTAACAAGGTTTGTGATGTTATTTCTAATGAAATCAAAGTCAAGAAAGACCAATCAATCATTACGTCAAGTTATTTTTCCAGAATGCCCGAGTCAGCTGCTAAACCTGAAATCACACGTAAAAATTTGGAGTCTCGATTGGAGAAAAATAGAGACTATGGTGTTGATGTTTCTCACTCAGTTCCAGTTCAAACTGATGCATCTGGAAAATTTGAGCCAGTTACAGCTAATACTTCATGCACTGCCTCCAAGTCAAAAGATATTTTAAATGATCTTTCTTCTGAAGTAAGTAATCCTTCAAATTCTGGTAATTCGAAATGCCATAATAAAATGTTGACCAAAACTTCTGGAAAGAGCTGGATTGAAGAAAACTTTCAGCAGTTTGAACCTTTATTTAAGAAGATTGGGGCTGGATTCAAAGATAACTACAATTTGGCAAAGATAAAGGCACAGGAGAACCCCTTGTCATTTGATGACATTACTAAAGTTAATTTTTGGGGAGTGGATGATGAACTTGAATGGATGAAAGATGAGAAGCTTCGAGAAATTGTTTTCCAAGTTCAAGAGAATGAGTTGGCTGGGAAGGATCCATTTCACTTGATGGATGCTGATGACCAAAAAGCCTTCTTTGAGGGGCTTGAACGAAAAACTGAGAAGGTCAATGAAAAACTGGCTGGGATGCATGAGTGGATACACTCGATGATTGAGAATCTAGACTATGGTGCAGATGGCATCAGCATTTACGATCCTTTGGAAAAAATCATTCCTCGTTGGAAAGGTCCACCTATTAACCTAGACCCTGAATTTATTGAGGAAATTAGGAACATAAGAAAAGCTAAAGACTATTCATTGGATAAGAAAGAGAACCTTCAGAAATCACATCACATGACAAATTCAAATGGCGTTTCTTCGTACTCTCCTGTAAATGATAGAATAAATTTATCACGGCGTGGAACATCTACAGCACCAAAAACGCTTATTGAAAGTAGCGATGGCTCTAGCAGACCCGGGAAGAAAAAGGGAAAGGAGCATTGGCAGCATACAAAGAGATGGTCCCAAGGCTTCCTAGAAGTTTATAATGCAGAGACAAATCCAGAGGTCAAAGCTGCTCTTAGGGATATGGGAAAGGATTTGGACAGATGGGCAACAGAAAAAGAAATAAAAGATGCGGCTGATTTAATTACTAGATTACCTGAAAAGAAGAAGAGATATATAGAAAAGAAAGTTAATAGAATTAAAAGAGAGGTGGAGATGTATGGGGCATCAGCAGTTGTTAACAAATATAAAGAATACGCAGAGGCAAAACAAGAAGATTACCTATGGTGGTTAGATCTTCATTTCGTTCTTTGCATTGAGCTATACTATTTGGAAGATAACGTTTCAAGGATTGGATTTTATTCCTTAGAAATGGCTGAAGATCTTGGGCTTAATCCTAAGCAATATCATGTGGTAGCTTTTGAAGATCCAGGAGACACTAAGAATTTTTGCCATATTGTACAAGCTCATATGAATATGTTGGGATCTGGTAAAGCTTTTGTTGTTGCTCGACGTCCGAAGGATGCTTTTAGAGATGCTAAAGCCAATGGATTTAGCGTTACTACGATTAGAAAAGGGGAAGTAAAACTAAATGTGGATCAAACTTTGGAGGAAGTAGAGGAAGAGCTTAAGGAGATTGGAAGTAAATTTTACCAAGAAAAGATCATGGACCAACGAGGTGCTGATATTCAGTCGATAATGAAGGGTGTAGTTGCTTATGATAGTTCTTGTAAAAGGTCGTAATGGACTGACTTAGCAAGCTGTATCCTGAGCATTTTGGTAACTGCAGAGTAGTACATTGCTTTATTTTCATACTTGTTGCTTCAGGAGTGGTCACATTCCAAGGCAGTTCTGATAATGTACATTTTATTAGAGATTTGGTATTCTGATAATGTAATTTTTTCATTTCTTATATTAGTTCATGTTTAGTTAAGAAAGCTTGAAGACATTGTATTGAGATAAACTAATCAATTTAATCATCTCACCCATGATAGTGCTTACAATCTGATCTCG

Network for GWHGAAEX015422

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
--	--	--	--	--

Protein Sequence

>GWHPAAEX015422
MDVSSPVRPTISFCYVSSYYSRNYTFSIQCGKKPAKYVLDHSIPFLKLPLWGSFAARRRAKLPVYAHFRRPPPRRNLLREKLIPRQDLALRLPEVSNSDISDFENLGLRDYGNDAHESSMNFDGEMESGGTDDSKGKVVFVNEDEISRRDRIQALSLEGGEDGEVKNVKYEITQTRLMTKDIEAGAYQLSRNGSIARFVVDGKKPSLACLFHFISTHRNSLVKIFPRIGFMVLCIFFVLVAVRKFFVGYYDVELTKEETEMLRRKKKSRMERENSQSGSVEVLQKGDELPVIHGIMPQMDRDVLMENLMQVKSLEDSLVLPDHAGRFTAEKHDFDKKVREIRNMVRNVHEAEHKNHSPKNNTGEQAELPSSIVDAELQAVGVADHAHQKSQSAKESERNGKESNIVNEIRILGGEKPNAMEGEHLNNFGNCGGNDAVNVEAQEMRASENLQKMLVGTHLIEPGDLNAVSLSNKKEVETSNMCNSNMKGEQPIKRASATSTNKKGKAKIITSLEEAKEYLNSKRRIHTNSEQPEQPIHVKGVSKAFNNQPDSSDGNLHILSETTEGSGFSTRFSVDNNTSFQTERSYGSIVSDLIFNEDENKIQSLSLQTEGIPKKNVEFQNEKLDCIMQRISNDDGASVSDNVQTGQNAGVSDLILYKNDDKIKNFPVQTDAIQKKNEDFQNVDPNGAKQNFLNVDGPFNLDNHPMRHNASVKDHISSGSKIPNETIQQYQTQSYNDHPFQNNQVANSKDIQPETLPLSALDKNDWKMLNRLSHTHSNIQEELLDHVVLGNSENINKVCDVISNEIKVKKDQSIITSSYFSRMPESAAKPEITRKNLESRLEKNRDYGVDVSHSVPVQTDASGKFEPVTANTSCTASKSKDILNDLSSEVSNPSNSGNSKCHNKMLTKTSGKSWIEENFQQFEPLFKKIGAGFKDNYNLAKIKAQENPLSFDDITKVNFWGVDDELEWMKDEKLREIVFQVQENELAGKDPFHLMDADDQKAFFEGLERKTEKVNEKLAGMHEWIHSMIENLDYGADGISIYDPLEKIIPRWKGPPINLDPEFIEEIRNIRKAKDYSLDKKENLQKSHHMTNSNGVSSYSPVNDRINLSRRGTSTAPKTLIESSDGSSRPGKKKGKEHWQHTKRWSQGFLEVYNAETNPEVKAALRDMGKDLDRWATEKEIKDAADLITRLPEKKKRYIEKKVNRIKREVEMYGASAVVNKYKEYAEAKQEDYLWWLDLHFVLCIELYYLEDNVSRIGFYSLEMAEDLGLNPKQYHVVAFEDPGDTKNFCHIVQAHMNMLGSGKAFVVARRPKDAFRDAKANGFSVTTIRKGEVKLNVDQTLEEVEEELKEIGSKFYQEKIMDQRGADIQSIMKGVVAYDSSCKRS

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	5.840
SRP064423	SRR2545915	Juvenile tuber	9.400
SRP108465	SRR5643513	five period of Gastrodia elata	6.300
	SRR5643514	five period of Gastrodia elata	8.540
	SRR5643515	five period of Gastrodia elata	5.870
	SRR5643524	five period of Gastrodia elata	7.750
	SRR5643525	five period of Gastrodia elata	2.370
	SRR5643528	five period of Gastrodia elata	2.900
	SRR5643658	five period of Gastrodia elata	1.500
	SRR5643659	five period of Gastrodia elata	6.130
	SRR5643660	five period of Gastrodia elata	6.200
	SRR5643661	five period of Gastrodia elata	6.230
	SRR5643662	five period of Gastrodia elata	4.880
	SRR5643663	five period of Gastrodia elata	5.360
	SRR5643664	five period of Gastrodia elata	5.780
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	5.590
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	6.010
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.530
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.680
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	4.420
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	3.940
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	6.160
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	6.090
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	7.230
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	6.350
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	6.410
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	6.410
SRP279888	Gastro	Gastrodia elata tuber	5.75
	Juven	Juvenile tuber	5.83
	Mother_Gastro	Mother tuber of Gastrodia elata	2.15
	Mother_Juven	Mother tuber of Juvenile	3.40