Gene detail

Detail information of GWHGAAEX015427/evm.TU.scaffold_66.114

Functional Annotation

Database	Orthologs	E value	Annotation
COG	gi\|296138646\|ref\|YP_003645889.1\|	6.00E-16	serine/threonine protein kinase [Tsukamurella paurometabola DSM 20162]
KOG	KOG1989	5.00E-158	ARK protein kinase family
nr	gi\|743767303\|ref\|XP_010913910.1\|	0	PREDICTED: probable serine/threonine-protein kinase DDB_G0280111 [Elaeis guineensis]
Swissprot	tr\|Q5KQF5\|CIPKM_ORYSJ	7.00E-22	CBL-interacting protein kinase 22
trEMBL	tr\|A0A061DWJ1\|A0A061DWJ1_THECC	0	Serine/threonine-protein kinase DDB_G0280111 isoform 2 {ECO:0000313\|EMBL:EOX96762.1}
TAIR	AT2G32850	5.00E-158	Protein kinase superfamily protein

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000073	4227492	4253908	-

Transcript Sequence
>GWHTAAEX015427 TCAGATATGTGGATGTTCAAGCCATTTTCTGGTAAAGATCAAGCAGGATTAGAAGGCAGACTAATTGAAATTGGCAATGAAAAGATTCGCGTGCAGAATCCGATTGCTGAAGGAGGCTTTTCCTGCGTGTATCTTGCTCATGATGCTGCAAATGCATCCAAACAATATGCTCTTAAACAAGTGATATGCCAAGATGGGGAGTCACTTGATTTGGCAATGAAGGAGATCCAGGTGATGAAACTGCTCAAAGGACATCCGAATGTTGTTACTTTGGTTGCTCATACGATACTTGATATGGGTCGAAGGAAGGAGGTCCTTCTTGTTTTAGAATTCTGTGAGAAGTCATTGGTCAATGTTCTTGAGACCCGGGGAGCTGGCTACTTTGAGGAGAAACAGATTCTCTTAATATTCAGAAATATTTGCAATGCAGTTTTTGCCATGCATTCACTGTCTCCTCCTATTGCTCATAGGGACCTGAAAGCTGAAAATGTTCTCCTTGGGTTAGAAGGAGCTTGGAAATTATGTGACTTTGGCAGCACTTCAACAAATCACAAGCGCTTTGACAGGCCAGAAGAGATGGGAATTGAAGAAGACAATATCAGAAAGCACACTACGCCTGCATATAGAGCTCCAGAGATGTGGGATCTTTATCGAAGAGAAATTATATGCGAGAAAGTGGATGTTTGGGCTCTGGGGTGCCTTCTCTACAGAATATGCTTTTTCAAATCCGCATTTGATGGGGAATCTAAACTTCAGATCCTGAATGGGAACTATCGCATCCCTGAGGTGCCAAAATACTGTGCTCCTATAACAGCCCTGATCAAAGACATGCTTCAAGGCTCTCCTGATGCTCGGCCAGACATTACTCAGGTGTGGTTTCGTGTTAATGAGCTATTGCCTGTGGAGTTGCAGAAGCAATTGCCTGACAGCGCTGAAACTGCATTGTTGGATAATATGATTGCTGATGTGCGTAATGAAGGCACTCAAAGCAGAGTTCCTATTAAGCCAAGGAGGAGCCCCCCTCCTTTTGTGAAAGAAAAGAGCAGTAATATCTCACCTCAATCTCATGATGAACTTCAGAAAAAGCCTCCCATAAACTCTCAAATGGTGGGTGGGAGTGGAAATCCCTTGGGGGCATTTTGGTCCACACAATTTGCGAATAACTCGCACGTTGTAGAGGACAAAGGCGTATATTTTGATGAAGAGCCAGTGGTAAGTCATGCATCCAAGAACAGCCAGCCCAACCAAGGAAGAACCAATCTATCTACCCACAAATGGACTGAAGATGGTCGAACTGAGGACTTTAAAATGAGGTTCTCTCAGGAAAAAAAGGGAATTTCTCAAAATGAGGCATTCAATGCTTTTGCTGCCTGCTTTGATTCTAATAAGCCAATTTCTGGAAAAGCTTCTGTAATAAACAATAACACAAACAAATTAAAAAGGGAGGAGGAATTGGAGGCTGAGGTGGAGAGACTGAAGGAGCAGCTTAAACAATCCAACTTAGAGAAAGCAGAAGTCACATCTAAATACGAGAAGCTCTCTTCTATTTGCCGCTCCCAAAGACAGGAGATACAGGAGCTAAAGCTCAATCTAGCAACACTATCCCTACCGTTGGAAAACGACTCTCCGAGCCCCCGCTTCTCTAGCAGAAACTCACCCTCCGACAATCAGTTACGGGAAAAGATTGAAGGAAAGCACGCCAGCAACATCTCCCCTAACCGTCCTGATTCCAGGCCATGGCAGGCTTTTGCCGACGACCCGAAGGTGCAGTTGAAGAATTCAAAGTCCGTTAGGACGGTCAATGGGCGCCCCAACAGCAGCAAACGGTCGGATGTCAACAAGACCATTGATGAACTAAGCTTTGGAGAGGATAAGTTCACAGCTTCTTCTTCCTCAAGCTCCATTTCTTCTAGCTCTCCGGCCATCGGGAACTCTTCTCAACGTTTTGCGGCGGCCAATTCCAAGAAGGTAGAGTCCACCCAACCGGCTGGCTGGGCTGGTTTCTGATACTTTGCTCTGATTCCTATTCGTAGCCTCCAACTTTTTATAATATACCTATTCAATACCCCAATCTTAATATTTACAGCAAGTTACTAGTAGATATGAGGGCTAAGGAAACGTGGAGGTGATAGAGCTTTCTTATTTCTTATTGTAAAAACAAAAAGTTTAAGGGTTGAAGATGTATATTTGAATGTAGTAGGTGCCACGTATGTAAACATCCCTTGCTGCCTCTGCTGGGATATCCGGTTATTGAAAACTGTGTTGCACTAATCTCAAAGTTCATCCAATGAACGAAAAGCTGTGCCTATATAAAATTTGTGCTAGGAAATCTTGGTCCAAACTTCTCCTATGGTGATGTTAGTTAAAGGTGCTAAGGCAATGGGGGAGATGAAGACTATGTCAGCATATGTCATATCAGCAGGGGCTATAATGTGGATGCTGCCATTTTAATTTTATGGAGTTGGTCTCCTGTGTTTGGGAATTGTAGCTTGATTTGTTTAATGATGTTTATCTGATAATATATATAGTATGAAAGTTGTGTATTATGAATGTGTGATGGCTGAGATGCAGATGACCCGATGGCGGTTCTTGCAATTCTCGTTGATTCCCAGCATTCAGATCTTCCTAATGGCGGCGATTTTCTTCATTAATCGACTGATTTTGGCAACTGTCGTTTGCTCGATTTTTAGGGCAGTGCTGATCTTGCCTTCTGTGATCTTCCAATTGGTTTGTACATGTGATTTATTGTGTTTTATAGCTGGAACCTTCTTTGCACTATTCTCCCATCTTTTTTAAACAAGTAATTACTCTTTTAGAGCT

Network for GWHGAAEX015427

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.24	Pkinase	30	289	1.50E-38

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	NAK

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	Biological Process	protein phosphorylation
GO:0005524	Molecular Function	ATP binding
GO:0004672	Molecular Function	protein kinase activity

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	25.010
SRP064423	SRR2545915	Juvenile tuber	23.820
SRP108465	SRR5643513	five period of Gastrodia elata	23.720
	SRR5643514	five period of Gastrodia elata	18.940
	SRR5643515	five period of Gastrodia elata	21.040
	SRR5643524	five period of Gastrodia elata	18.830
	SRR5643525	five period of Gastrodia elata	26.730
	SRR5643528	five period of Gastrodia elata	28.520
	SRR5643658	five period of Gastrodia elata	24.960
	SRR5643659	five period of Gastrodia elata	25.670
	SRR5643660	five period of Gastrodia elata	28.420
	SRR5643661	five period of Gastrodia elata	26.050
	SRR5643662	five period of Gastrodia elata	28.880
	SRR5643663	five period of Gastrodia elata	27.320
	SRR5643664	five period of Gastrodia elata	27.450
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	21.210
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	26.810
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	18.690
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	24.850
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	22.900
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	27.470
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	22.970
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	23.490
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	18.360
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	18.470
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	19.730
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	19.730
SRP279888	Gastro	Gastrodia elata tuber	30.22
	Juven	Juvenile tuber	43.65
	Mother_Gastro	Mother tuber of Gastrodia elata	28.52
	Mother_Juven	Mother tuber of Juvenile	33.23