Detail information of GWHGAAEX015429/evm.TU.scaffold_66.116


Functional Annotation

DatabaseOrthologsE valueAnnotation
KOGKOG39035.00E-44Mitotic checkpoint protein PRCC
nrgi|743766976|ref|XP_010913735.1|2.65E-82PREDICTED: proline-rich protein PRCC [Elaeis guineensis]
trEMBLtr|M0SIF1|M0SIF1_MUSAM2.00E-67Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr3P27850_001}
TAIRAT2G192705.00E-44Unannotated protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000007344163514436075+
Transcript Sequence

Network for GWHGAAEX015429

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF10253.8PRCC2154102.10E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms13.080
SRR2545915Juvenile tuber11.670
SRP108465SRR5643513five period of Gastrodia elata19.180
SRR5643514five period of Gastrodia elata21.490
SRR5643515five period of Gastrodia elata22.000
SRR5643524five period of Gastrodia elata25.470
SRR5643525five period of Gastrodia elata30.050
SRR5643528five period of Gastrodia elata28.590
SRR5643658five period of Gastrodia elata35.780
SRR5643659five period of Gastrodia elata27.740
SRR5643660five period of Gastrodia elata27.610
SRR5643661five period of Gastrodia elata30.910
SRR5643662five period of Gastrodia elata24.400
SRR5643663five period of Gastrodia elata28.860
SRR5643664five period of Gastrodia elata26.560
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_115.920
SRR6049655Rhizomagastrodiae_C368-T10_good_121.430
SRR6049656Rhizomagastrodiae_C368-T07_good_115.610
SRR6049657Rhizomagastrodiae_C368-T07_good_114.780
SRR6049658Rhizomagastrodiae_C368-T04_good_114.320
SRR6049659Rhizomagastrodiae_C368-T04_good_115.520
SRR6049660Rhizomagastrodiae_C368-T01_good_114.890
SRR6049661Rhizomagastrodiae_C368-T04_good_115.860
SRR6049662Rhizomagastrodiae_C368-T01_good_113.270
SRR6049663Rhizomagastrodiae_C368-T01_good_114.600
SRR6049664Rhizomagastrodiae_C368-T10_good_120.520
SRR6049665Rhizomagastrodiae_C368-T10_good_120.520
SRP279888GastroGastrodia elata tuber 19.00
JuvenJuvenile tuber27.56
Mother_GastroMother tuber of Gastrodia elata 21.41
Mother_JuvenMother tuber of Juvenile 19.85