Detail information of GWHGAAEX015445/evm.TU.scaffold_67.16
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|440680994|ref|YP_007155789.1| | 2.00E-114 | 12-oxophytodienoate reductase [Anabaena cylindrica PCC 7122] |
| KOG | KOG0134 | 0 | NADH:flavin oxidoreductase/12-oxophytodienoate reductase |
| nr | gi|743764974|ref|XP_010912703.1| | 0 | PREDICTED: putative 12-oxophytodienoate reductase 11 [Elaeis guineensis] |
| Swissprot | tr|B9FSC8|OPR11_ORYSJ | 0 | Putative 12-oxophytodienoate reductase 11 |
| trEMBL | tr|M0S9S1|M0S9S1_MUSAM | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr2P20800_001} |
| TAIR | AT1G76680 | 0 | 12-oxophytodienoate reductase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000065 | 553970 | 555722 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015445
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00724.19 | Oxidored_FMN | 10 | 343 | 6.90E-88 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K05894 | OPR | Metabolic pathways | map01100 |
| Biosynthesis of secondary metabolites | map01110 | ||
| alpha-Linolenic acid metabolism | map00592 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0016491 | Molecular Function | oxidoreductase activity |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0010181 | Molecular Function | FMN binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 15.150 |
| SRR2545915 | Juvenile tuber | 3.620 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 28.360 |
| SRR5643514 | five period of Gastrodia elata | 100.770 | |
| SRR5643515 | five period of Gastrodia elata | 109.620 | |
| SRR5643524 | five period of Gastrodia elata | 161.820 | |
| SRR5643525 | five period of Gastrodia elata | 17.610 | |
| SRR5643528 | five period of Gastrodia elata | 627.720 | |
| SRR5643658 | five period of Gastrodia elata | 47.850 | |
| SRR5643659 | five period of Gastrodia elata | 53.070 | |
| SRR5643660 | five period of Gastrodia elata | 25.820 | |
| SRR5643661 | five period of Gastrodia elata | 12.440 | |
| SRR5643662 | five period of Gastrodia elata | 14.420 | |
| SRR5643663 | five period of Gastrodia elata | 4.870 | |
| SRR5643664 | five period of Gastrodia elata | 2.190 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 9.210 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 7.850 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 18.790 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 4.630 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 5.380 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 8.230 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 39.130 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 8.250 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 49.800 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 85.170 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 7.760 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 7.760 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 3.16 |
| Juven | Juvenile tuber | 8.17 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 482.77 | |
| Mother_Juven | Mother tuber of Juvenile | 1,168.68 |