Gene detail

Detail information of GWHGAAEX015456/evm.TU.scaffold_67.35

Functional Annotation

Database	Orthologs	E value	Annotation
nr	gi\|672121090\|ref\|XP_008783838.1\|	3.19E-143	PREDICTED: uncharacterized protein LOC103702959 isoform X1 [Phoenix dactylifera]
trEMBL	tr\|A0A067H687\|A0A067H687_CITSI	7.00E-142	Uncharacterized protein {ECO:0000313\|EMBL:KDO86440.1}
TAIR	AT2G46420	2.00E-100	Plant protein 1589 of unknown function

Location And Transcript Sequence

Scaffold	Start	End	Strand
GWHAAEX00000065	1582718	1639043	-

Transcript Sequence
>GWHTAAEX015456 CCGTGATCCCATAAAAGGGTGCTATTAAAGAGGTCCTAAGCGCAGCAGCACCCCAGCTCAATGGCCCTCATTTCTCTCAATCACGCCGGAACAGCCTGCAAGTTGCCGTCTCCCGTAAGTTAGGAAAAAAACTTGTTGGGGGGACCACCGTTATTGATATTATCTTAATTTGAAATCTTATGGTTATAAAAAGGGCAAATGAAGGTCAAGATATAGTTTTACTGAGTAAAAAATGAAGCATGTACAGAATTCTCCAGGTGTCTCAGAAATGCAATTATCTTCACAAGATATTCAAGATAACGTACAGAATAATGAATACGATGAACCTCACACAGAAGATTCTAATTCAATATCTGCTGCAAACAGTGATAACAAGAGAGTCTCTCGTGAAGATATTGAACTTGTTCAAAACCTGATAGAACGGTGTTTACAACTCTATATGAATAAAGGAGAAGTGGTTAAAACACTGTTTAATCGAGCCAGAATTGAGCCGGGCTTTACCACCTTAGTATGGCAGAAACTTGAAGAAGAGAATTCTGAATTTTTCAGGGCTTACTACATAAGGCTGAAACTGAAAAAACAGATCCTCATGTTCAATCATTTACTAGAGCATCAGTACCACATGATGAAAAGTACTATTCCACATAAAGTTCCACTGGTTTCCATGCAAAATGGAATCCATCCTATTCCAGTTAACAATCTACCTATGGGATACCCAAGCTTCCATCCTGCACAAATACTGACATCAGCTCAACCTAATCTTAATTCTGTACGTTGTGGGCTACCAAGCTGTCATGTAGTCAATGGTACACCTGCACCTGCTGGTTTTCAGCCCGTCCTAATATATTCTGGAAATGAAACTTCTGTGGAAGCTCCAGCTGCAGGTCCGTGCAGTGTTGTGTCAACTGCTAATGATATTATTAGCCCTGCATCGGCAGCATTGAGCAATCACTTCACTTTCACTCAAGCTGAGATGTCAGGTATGGGTATGGATGCTACAGCTTTGGATCCATCCTTCACATCTGATGTTGATGATGGCAGTGGGCCATTCAGATACCCCAGATCTTTAAGCCAGCTTTGGAATTTCAGCCTTTCTGACCTGACAACTGATTTGACAAACTTGGGAGATATTGGACCTCCGGAAGATTACAGTGGCTCTCCATTCTTGCGACTCGACTGTGATTTGCTTGATTCACCCGAACCAGATGATACTGTTGAGGAATACTTCGCAGATGCCATCAACAACGGGCCATGCTCTCAGTCAGATGAGGAGAAATCATAGTAATAACCTTTTTTTTTTCTTATTTAGAATTTTTATTTTAAAAAATAGTGGAAGAATAATTAGAGCGATTTTTTGTGTATTCTCATATTGATCTAAACATTCACTAAGCAGGCAGGATAAGTTTTCTCTGTTTGTTAAATTGCAGTGTATTTGTTTAATTAATTTAATATAATTGAGGTTGCTCTCTCCTATAAAATATCACATTAAGTTGC

Network for GWHGAAEX015456

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF09713.9	A_thal_3526	58	109	1.40E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name

Expression pattern

SRP	Sample	Description	FPKM
SRP064423	SRR2545914	vegetative propagation corms	13.010
SRP064423	SRR2545915	Juvenile tuber	12.360
SRP108465	SRR5643513	five period of Gastrodia elata	6.440
	SRR5643514	five period of Gastrodia elata	5.470
	SRR5643515	five period of Gastrodia elata	5.130
	SRR5643524	five period of Gastrodia elata	5.930
	SRR5643525	five period of Gastrodia elata	4.640
	SRR5643528	five period of Gastrodia elata	4.220
	SRR5643658	five period of Gastrodia elata	4.770
	SRR5643659	five period of Gastrodia elata	6.440
	SRR5643660	five period of Gastrodia elata	6.330
	SRR5643661	five period of Gastrodia elata	6.940
	SRR5643662	five period of Gastrodia elata	5.290
	SRR5643663	five period of Gastrodia elata	6.380
	SRR5643664	five period of Gastrodia elata	5.140
SRP118053	SRR6049654	Rhizomagastrodiae_C368-T07_good_1	6.360
	SRR6049655	Rhizomagastrodiae_C368-T10_good_1	8.520
	SRR6049656	Rhizomagastrodiae_C368-T07_good_1	5.690
	SRR6049657	Rhizomagastrodiae_C368-T07_good_1	5.600
	SRR6049658	Rhizomagastrodiae_C368-T04_good_1	5.960
	SRR6049659	Rhizomagastrodiae_C368-T04_good_1	4.520
	SRR6049660	Rhizomagastrodiae_C368-T01_good_1	7.200
	SRR6049661	Rhizomagastrodiae_C368-T04_good_1	5.200
	SRR6049662	Rhizomagastrodiae_C368-T01_good_1	10.270
	SRR6049663	Rhizomagastrodiae_C368-T01_good_1	9.430
	SRR6049664	Rhizomagastrodiae_C368-T10_good_1	7.230
	SRR6049665	Rhizomagastrodiae_C368-T10_good_1	7.230
SRP279888	Gastro	Gastrodia elata tuber	9.43
	Juven	Juvenile tuber	11.94
	Mother_Gastro	Mother tuber of Gastrodia elata	9.88
	Mother_Juven	Mother tuber of Juvenile	12.06