Detail information of GWHGAAEX015457/evm.TU.scaffold_67.36
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|14520453|ref|NP_125928.1| | 5.00E-12 | serine protease htra related protein [Pyrococcus abyssi GE5] |
| KOG | KOG2921 | 5.00E-78 | Intramembrane metalloprotease (sterol-regulatory element-binding protein (SREBP) protease) |
| nr | gi|743797004|ref|XP_010924872.1| | 8.79E-139 | PREDICTED: membrane-bound transcription factor site-2 protease [Elaeis guineensis] |
| trEMBL | tr|W5CUM3|W5CUM3_WHEAT | 3.00E-113 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Traes_3B_4C74EA23B.1} |
| TAIR | AT4G20310 | 5.00E-78 | Peptidase M50 family protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000065 | 1808415 | 1864562 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015457
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF02163.21 | Peptidase_M50 | 131 | 474 | 5.80E-11 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K07765 | MBTPS2 | Protein processing in endoplasmic reticulum | map04141 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0006508 | Biological Process | proteolysis |
| GO:0004222 | Molecular Function | metalloendopeptidase activity |
| GO:0016020 | Cellular Component | membrane |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 22.590 |
| SRR2545915 | Juvenile tuber | 16.210 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 9.880 |
| SRR5643514 | five period of Gastrodia elata | 11.190 | |
| SRR5643515 | five period of Gastrodia elata | 11.420 | |
| SRR5643524 | five period of Gastrodia elata | 11.060 | |
| SRR5643525 | five period of Gastrodia elata | 13.220 | |
| SRR5643528 | five period of Gastrodia elata | 12.720 | |
| SRR5643658 | five period of Gastrodia elata | 12.260 | |
| SRR5643659 | five period of Gastrodia elata | 9.590 | |
| SRR5643660 | five period of Gastrodia elata | 8.750 | |
| SRR5643661 | five period of Gastrodia elata | 8.910 | |
| SRR5643662 | five period of Gastrodia elata | 10.500 | |
| SRR5643663 | five period of Gastrodia elata | 9.770 | |
| SRR5643664 | five period of Gastrodia elata | 9.990 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 10.790 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 11.840 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 10.990 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 13.590 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 13.020 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 13.010 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 11.930 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 12.280 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 11.470 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 10.570 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 12.780 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 12.780 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 12.28 |
| Juven | Juvenile tuber | 16.48 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 16.88 | |
| Mother_Juven | Mother tuber of Juvenile | 22.12 |