Detail information of GWHGAAEX015467/evm.TU.scaffold_67.70


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|333911292|ref|YP_004485025.1|3.00E-1330S ribosomal protein S8 [Methanotorris igneus Kol 5]
KOGKOG32838.00E-11840S ribosomal protein S8
nrgi|115457852|ref|NP_001052526.1|2.95E-129Os04g0349500 [Oryza sativa Japonica Group]
Swissprottr|Q08069|RS8_MAIZE9.00E-13540S ribosomal protein S8
trEMBLtr|C5YDP0|C5YDP0_SORBI7.00E-13440S ribosomal protein S8 {ECO:0000256|RuleBase:RU000669}
TAIRAT5G592408.00E-118Ribosomal protein S8e family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006536664503673973+
Transcript Sequence

Network for GWHGAAEX015467

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01201.21Ribosomal_S8e12023.60E-57
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K02995RP-S8e, RPS8 Ribosome map03010

Gene Ontology

GO term OntologyName
GO:0006412Biological Processtranslation
GO:0003735Molecular Functionstructural constituent of ribosome
GO:0005840Cellular Componentribosome

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms305.640
SRR2545915Juvenile tuber305.680
SRP108465SRR5643513five period of Gastrodia elata512.730
SRR5643514five period of Gastrodia elata520.820
SRR5643515five period of Gastrodia elata519.510
SRR5643524five period of Gastrodia elata535.880
SRR5643525five period of Gastrodia elata300.630
SRR5643528five period of Gastrodia elata330.050
SRR5643658five period of Gastrodia elata243.130
SRR5643659five period of Gastrodia elata511.450
SRR5643660five period of Gastrodia elata495.830
SRR5643661five period of Gastrodia elata536.340
SRR5643662five period of Gastrodia elata389.600
SRR5643663five period of Gastrodia elata404.140
SRR5643664five period of Gastrodia elata380.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_1460.370
SRR6049655Rhizomagastrodiae_C368-T10_good_1733.990
SRR6049656Rhizomagastrodiae_C368-T07_good_1501.990
SRR6049657Rhizomagastrodiae_C368-T07_good_1469.630
SRR6049658Rhizomagastrodiae_C368-T04_good_1437.900
SRR6049659Rhizomagastrodiae_C368-T04_good_1409.990
SRR6049660Rhizomagastrodiae_C368-T01_good_1478.760
SRR6049661Rhizomagastrodiae_C368-T04_good_1449.170
SRR6049662Rhizomagastrodiae_C368-T01_good_1587.910
SRR6049663Rhizomagastrodiae_C368-T01_good_1528.450
SRR6049664Rhizomagastrodiae_C368-T10_good_1639.550
SRR6049665Rhizomagastrodiae_C368-T10_good_1639.550
SRP279888GastroGastrodia elata tuber 405.95
JuvenJuvenile tuber508.63
Mother_GastroMother tuber of Gastrodia elata 204.90
Mother_JuvenMother tuber of Juvenile 304.43