Detail information of GWHGAAEX015469/evm.TU.scaffold_67.72
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|332290156|ref|YP_004421008.1| | 9.00E-47 | glyoxalase I [Gallibacterium anatis UMN179] |
| KOG | KOG2943 | 0 | Predicted glyoxalase |
| nr | gi|719993953|ref|XP_010254032.1| | 0 | PREDICTED: probable lactoylglutathione lyase, chloroplast [Nelumbo nucifera] |
| Swissprot | tr|Q8W593|LGUC_ARATH | 0 | Probable lactoylglutathione lyase, chloroplast (Precursor) |
| trEMBL | tr|W1NPN1|W1NPN1_AMBTC | 0 | Lactoylglutathione lyase {ECO:0000256|RuleBase:RU361179} |
| TAIR | AT1G67280 | 0 | Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000065 | 3727984 | 3766466 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015469
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF00903.24 | Glyoxalase | 90 | 210 | 1.70E-22 |
| PF00903.24 | Glyoxalase | 222 | 337 | 1.10E-14 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K01759 | GLO1, gloA | Metabolic pathways | map01100 |
| Pyruvate metabolism | map00620 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0004462 | Molecular Function | lactoylglutathione lyase activity |
| GO:0046872 | Molecular Function | metal ion binding |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 57.800 |
| SRR2545915 | Juvenile tuber | 59.190 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 48.830 |
| SRR5643514 | five period of Gastrodia elata | 53.280 | |
| SRR5643515 | five period of Gastrodia elata | 66.840 | |
| SRR5643524 | five period of Gastrodia elata | 49.540 | |
| SRR5643525 | five period of Gastrodia elata | 78.040 | |
| SRR5643528 | five period of Gastrodia elata | 94.760 | |
| SRR5643658 | five period of Gastrodia elata | 66.440 | |
| SRR5643659 | five period of Gastrodia elata | 60.260 | |
| SRR5643660 | five period of Gastrodia elata | 59.100 | |
| SRR5643661 | five period of Gastrodia elata | 68.930 | |
| SRR5643662 | five period of Gastrodia elata | 105.890 | |
| SRR5643663 | five period of Gastrodia elata | 98.910 | |
| SRR5643664 | five period of Gastrodia elata | 85.290 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 51.120 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 56.510 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 48.830 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 45.870 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 45.340 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 44.940 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 40.800 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 46.490 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 41.890 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 39.590 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 42.720 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 42.720 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 143.21 |
| Juven | Juvenile tuber | 64.18 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 54.41 | |
| Mother_Juven | Mother tuber of Juvenile | 47.77 |