Detail information of GWHGAAEX015477/evm.TU.scaffold_67.84


Functional Annotation

DatabaseOrthologsE valueAnnotation
COGgi|428202942|ref|YP_007081531.1|2.00E-62Zn-dependent oxidoreductase [Pleurocapsa sp. PCC 7327]
KOGKOG11983.00E-152Zinc-binding oxidoreductase
nrgi|698422321|ref|XP_009780536.1|1.12E-163PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic [Nicotiana sylvestris]
Swissprottr|Q9SV68|QORH_ARATH8.00E-153Putative quinone-oxidoreductase homolog, chloroplastic
trEMBLtr|M1C990|M1C990_SOLTU1.00E-161Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400062565}
TAIRAT4G130103.00E-152Oxidoreductase, zinc-binding dehydrogenase family protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX0000006543746774402087+
Transcript Sequence

Network for GWHGAAEX015477

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation
Module3

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08240.11ADH_N391023.10E-08
PF13602.5ADH_zinc_N_22023314.00E-20
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K00224CEQORH Biosynthesis of secondary metabolites map01110
alpha-Linolenic acid metabolismmap00592

Gene Ontology

GO term OntologyName
GO:0055114Biological Processoxidation-reduction process
GO:0016491Molecular Functionoxidoreductase activity

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms0.390
SRR2545915Juvenile tuber2.660
SRP108465SRR5643513five period of Gastrodia elata26.590
SRR5643514five period of Gastrodia elata30.610
SRR5643515five period of Gastrodia elata35.960
SRR5643524five period of Gastrodia elata31.820
SRR5643525five period of Gastrodia elata39.140
SRR5643528five period of Gastrodia elata30.670
SRR5643658five period of Gastrodia elata35.500
SRR5643659five period of Gastrodia elata83.030
SRR5643660five period of Gastrodia elata54.870
SRR5643661five period of Gastrodia elata102.110
SRR5643662five period of Gastrodia elata79.770
SRR5643663five period of Gastrodia elata66.280
SRR5643664five period of Gastrodia elata69.250
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_111.900
SRR6049655Rhizomagastrodiae_C368-T10_good_113.420
SRR6049656Rhizomagastrodiae_C368-T07_good_110.400
SRR6049657Rhizomagastrodiae_C368-T07_good_112.480
SRR6049658Rhizomagastrodiae_C368-T04_good_14.940
SRR6049659Rhizomagastrodiae_C368-T04_good_14.040
SRR6049660Rhizomagastrodiae_C368-T01_good_17.090
SRR6049661Rhizomagastrodiae_C368-T04_good_16.790
SRR6049662Rhizomagastrodiae_C368-T01_good_16.950
SRR6049663Rhizomagastrodiae_C368-T01_good_13.680
SRR6049664Rhizomagastrodiae_C368-T10_good_121.130
SRR6049665Rhizomagastrodiae_C368-T10_good_121.130
SRP279888GastroGastrodia elata tuber 22.32
JuvenJuvenile tuber18.60
Mother_GastroMother tuber of Gastrodia elata 9.33
Mother_JuvenMother tuber of Juvenile 10.46