Detail information of GWHGAAEX015497/evm.TU.scaffold_68.8
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|297565070|ref|YP_003684042.1| | 7.00E-15 | Fumble domain-containing protein [Meiothermus silvanus DSM 9946] |
| KOG | KOG2201 | 7.00E-115 | Pantothenate kinase PanK and related proteins |
| nr | gi|743823206|ref|XP_010932471.1| | 0 | PREDICTED: pantothenate kinase 1 isoform X1 [Elaeis guineensis] |
| Swissprot | tr|Q69TF4|PANK1_ORYSJ | 0 | Pantothenate kinase 1 |
| trEMBL | tr|K3XVQ1|K3XVQ1_SETIT | 0 | Uncharacterized protein {ECO:0000313|EnsemblPlants:Si006009m} |
| TAIR | AT4G32180_1 | 7.00E-115 | Unannotated protein |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000064 | 224137 | 309647 | + |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015497
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF03630.13 | Fumble | 42 | 360 | 6.80E-111 |
| PF03630.13 | Fumble | 380 | 583 | 9.40E-76 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K09680 | coaW | Metabolic pathways | map01100 |
| Pantothenate and CoA biosynthesis | map00770 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0015937 | Biological Process | coenzyme A biosynthetic process |
| GO:0005524 | Molecular Function | ATP binding |
| GO:0004594 | Molecular Function | pantothenate kinase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 9.270 |
| SRR2545915 | Juvenile tuber | 6.830 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 11.260 |
| SRR5643514 | five period of Gastrodia elata | 13.960 | |
| SRR5643515 | five period of Gastrodia elata | 11.540 | |
| SRR5643524 | five period of Gastrodia elata | 13.120 | |
| SRR5643525 | five period of Gastrodia elata | 17.790 | |
| SRR5643528 | five period of Gastrodia elata | 19.640 | |
| SRR5643658 | five period of Gastrodia elata | 19.820 | |
| SRR5643659 | five period of Gastrodia elata | 7.990 | |
| SRR5643660 | five period of Gastrodia elata | 9.480 | |
| SRR5643661 | five period of Gastrodia elata | 7.010 | |
| SRR5643662 | five period of Gastrodia elata | 7.410 | |
| SRR5643663 | five period of Gastrodia elata | 8.480 | |
| SRR5643664 | five period of Gastrodia elata | 8.090 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 10.280 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 12.230 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 11.390 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 10.540 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 8.810 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 10.400 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 9.710 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 9.920 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 11.760 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 10.230 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 13.790 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 13.790 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 10.85 |
| Juven | Juvenile tuber | 10.52 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 11.39 | |
| Mother_Juven | Mother tuber of Juvenile | 10.09 |