Detail information of GWHGAAEX015500/evm.TU.scaffold_68.13


Functional Annotation

DatabaseOrthologsE valueAnnotation
nrgi|695058737|ref|XP_009417693.1|4.80E-174PREDICTED: protein Brevis radix-like 1 [Musa acuminata subsp. malaccensis]
Swissprottr|Q6YUB8|BRXL1_ORYSJ1.00E-147Protein Brevis radix-like 1
trEMBLtr|M0U0Q7|M0U0Q7_MUSAM2.00E-174Uncharacterized protein {ECO:0000313|EnsemblPlants:GSMUA_Achr9P16000_001}
TAIRAT3G140005.00E-120DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein

Location And Transcript Sequence

ScaffoldStartEndStrand
GWHAAEX00000064434932458247-
Transcript Sequence

Network for GWHGAAEX015500

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist

Functional Module

Module IDFunction Annotation

Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13713.5BRX_N29611.40E-14
PF08381.10BRX1371919.70E-27
PF08381.10BRX3343891.20E-27
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern

SRPSampleDescriptionFPKM
SRP064423SRR2545914vegetative propagation corms8.970
SRR2545915Juvenile tuber6.520
SRP108465SRR5643513five period of Gastrodia elata9.720
SRR5643514five period of Gastrodia elata6.820
SRR5643515five period of Gastrodia elata9.930
SRR5643524five period of Gastrodia elata5.210
SRR5643525five period of Gastrodia elata9.990
SRR5643528five period of Gastrodia elata10.800
SRR5643658five period of Gastrodia elata11.710
SRR5643659five period of Gastrodia elata10.000
SRR5643660five period of Gastrodia elata9.050
SRR5643661five period of Gastrodia elata8.410
SRR5643662five period of Gastrodia elata11.090
SRR5643663five period of Gastrodia elata8.500
SRR5643664five period of Gastrodia elata14.490
SRP118053SRR6049654Rhizomagastrodiae_C368-T07_good_17.450
SRR6049655Rhizomagastrodiae_C368-T10_good_13.240
SRR6049656Rhizomagastrodiae_C368-T07_good_18.100
SRR6049657Rhizomagastrodiae_C368-T07_good_17.790
SRR6049658Rhizomagastrodiae_C368-T04_good_16.310
SRR6049659Rhizomagastrodiae_C368-T04_good_17.500
SRR6049660Rhizomagastrodiae_C368-T01_good_17.640
SRR6049661Rhizomagastrodiae_C368-T04_good_16.670
SRR6049662Rhizomagastrodiae_C368-T01_good_15.760
SRR6049663Rhizomagastrodiae_C368-T01_good_15.250
SRR6049664Rhizomagastrodiae_C368-T10_good_16.860
SRR6049665Rhizomagastrodiae_C368-T10_good_16.860
SRP279888GastroGastrodia elata tuber 10.29
JuvenJuvenile tuber6.38
Mother_GastroMother tuber of Gastrodia elata 10.65
Mother_JuvenMother tuber of Juvenile 9.60