Detail information of GWHGAAEX015510/evm.TU.scaffold_68.26
Functional Annotation
| Database | Orthologs | E value | Annotation |
|---|---|---|---|
| COG | gi|428208656|ref|YP_007093009.1| | 9.00E-74 | FAD linked oxidase domain-containing protein [Chroococcidiopsis thermalis PCC 7203] |
| KOG | KOG1231 | 2.00E-134 | Proteins containing the FAD binding domain |
| nr | gi|743773655|ref|XP_010917178.1| | 0 | PREDICTED: cytokinin dehydrogenase 11-like [Elaeis guineensis] |
| Swissprot | tr|Q6Z955|CKX11_ORYSJ | 0 | Cytokinin dehydrogenase 11 (Precursor) |
| trEMBL | tr|D3JAJ5|D3JAJ5_WHEAT | 0 | Cytokinin oxidase/dehydrogenase 3 {ECO:0000313|EMBL:ADB81979.1} |
| TAIR | AT2G41510 | 2.00E-134 | cytokinin oxidase/dehydrogenase 1 |
Location And Transcript Sequence
| Scaffold | Start | End | Strand |
|---|---|---|---|
| GWHAAEX00000064 | 1213294 | 1216183 | - |
 | |||
| Transcript Sequence | |||
Network for GWHGAAEX015510
| Network category | Network | Top300 PCC genelist |
|---|---|---|
| Coexpression Positive | Network | Top300 PCC genelist |
| Coexpression Negative | Network | Top300 PCC genelist |
Functional Module
| Module ID | Function Annotation |
|---|---|
| Module4 |
Protein Structure
| Pfam accession | Pfam name | Alignment start | Alignment end | E-value |
|---|---|---|---|---|
| PF01565.22 | FAD_binding_4 | 45 | 185 | 1.30E-29 |
| PF09265.9 | Cytokin-bind | 218 | 497 | 2.80E-95 |
 | ||||
| Protein Sequence | ||||
Gene family
| Gene family | subfamily |
|---|---|
| -- | -- |
KEGG pathway
| KO | Enzyme | pathway | mapID |
|---|---|---|---|
| K00279 | CKX | Zeatin biosynthesis | map00908 |
Gene Ontology
| GO term | Ontology | Name |
|---|---|---|
| GO:0009690 | Biological Process | cytokinin metabolic process |
| GO:0055114 | Biological Process | oxidation-reduction process |
| GO:0003824 | Molecular Function | catalytic activity |
| GO:0050660 | Molecular Function | flavin adenine dinucleotide binding |
| GO:0071949 | Molecular Function | FAD binding |
| GO:0019139 | Molecular Function | cytokinin dehydrogenase activity |
| GO:0016491 | Molecular Function | oxidoreductase activity |
Expression pattern
| SRP | Sample | Description | FPKM |
|---|---|---|---|
| SRP064423 | SRR2545914 | vegetative propagation corms | 11.810 |
| SRR2545915 | Juvenile tuber | 12.250 | |
| SRP108465 | SRR5643513 | five period of Gastrodia elata | 39.570 |
| SRR5643514 | five period of Gastrodia elata | 46.460 | |
| SRR5643515 | five period of Gastrodia elata | 37.780 | |
| SRR5643524 | five period of Gastrodia elata | 31.440 | |
| SRR5643525 | five period of Gastrodia elata | 46.480 | |
| SRR5643528 | five period of Gastrodia elata | 32.780 | |
| SRR5643658 | five period of Gastrodia elata | 48.500 | |
| SRR5643659 | five period of Gastrodia elata | 33.190 | |
| SRR5643660 | five period of Gastrodia elata | 38.020 | |
| SRR5643661 | five period of Gastrodia elata | 33.150 | |
| SRR5643662 | five period of Gastrodia elata | 36.220 | |
| SRR5643663 | five period of Gastrodia elata | 32.900 | |
| SRR5643664 | five period of Gastrodia elata | 53.060 | |
| SRP118053 | SRR6049654 | Rhizomagastrodiae_C368-T07_good_1 | 59.380 |
| SRR6049655 | Rhizomagastrodiae_C368-T10_good_1 | 23.690 | |
| SRR6049656 | Rhizomagastrodiae_C368-T07_good_1 | 64.770 | |
| SRR6049657 | Rhizomagastrodiae_C368-T07_good_1 | 42.950 | |
| SRR6049658 | Rhizomagastrodiae_C368-T04_good_1 | 48.690 | |
| SRR6049659 | Rhizomagastrodiae_C368-T04_good_1 | 33.700 | |
| SRR6049660 | Rhizomagastrodiae_C368-T01_good_1 | 65.400 | |
| SRR6049661 | Rhizomagastrodiae_C368-T04_good_1 | 41.370 | |
| SRR6049662 | Rhizomagastrodiae_C368-T01_good_1 | 79.540 | |
| SRR6049663 | Rhizomagastrodiae_C368-T01_good_1 | 87.010 | |
| SRR6049664 | Rhizomagastrodiae_C368-T10_good_1 | 73.000 | |
| SRR6049665 | Rhizomagastrodiae_C368-T10_good_1 | 73.000 | |
| SRP279888 | Gastro | Gastrodia elata tuber | 40.45 |
| Juven | Juvenile tuber | 71.68 | |
| Mother_Gastro | Mother tuber of Gastrodia elata | 156.00 | |
| Mother_Juven | Mother tuber of Juvenile | 64.50 |